Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
TRUB2O95900 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
TRUB2O95900 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRUB2O95900 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRUB2O95900 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRUB2O95900 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRUB2O95900 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRUB2O95900 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRUB2O95900 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.69■□□□□ 0.74
TRUB2O95900 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRUB2O95900 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.69■□□□□ 0.74
TRUB2O95900 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRUB2O95900 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRUB2O95900 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRUB2O95900 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.68■□□□□ 0.74
TRUB2O95900 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.68■□□□□ 0.74
TRUB2O95900 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.68■□□□□ 0.74
TRUB2O95900 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.68■□□□□ 0.74
TRUB2O95900 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.68■□□□□ 0.74
TRUB2O95900 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.68■□□□□ 0.74
TRUB2O95900 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.68■□□□□ 0.74
TRUB2O95900 AP003041.3-201ENST00000527151 707 ntBASIC19.68■□□□□ 0.74
TRUB2O95900 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.68■□□□□ 0.74
TRUB2O95900 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRUB2O95900 AC010653.2-201ENST00000623505 997 ntBASIC19.68■□□□□ 0.74
TRUB2O95900 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRUB2O95900 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRUB2O95900 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRUB2O95900 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRUB2O95900 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.68■□□□□ 0.74
TRUB2O95900 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRUB2O95900 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.68■□□□□ 0.74
TRUB2O95900 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRUB2O95900 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRUB2O95900 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRUB2O95900 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TRUB2O95900 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRUB2O95900 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.67■□□□□ 0.74
TRUB2O95900 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRUB2O95900 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.67■□□□□ 0.74
TRUB2O95900 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
TRUB2O95900 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.67■□□□□ 0.74
TRUB2O95900 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.67■□□□□ 0.74
TRUB2O95900 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.67■□□□□ 0.74
TRUB2O95900 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.67■□□□□ 0.74
TRUB2O95900 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.67■□□□□ 0.74
TRUB2O95900 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.67■□□□□ 0.74
TRUB2O95900 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.67■□□□□ 0.74
TRUB2O95900 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.67■□□□□ 0.74
TRUB2O95900 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
TRUB2O95900 FAM87A-204ENST00000613235 858 ntBASIC19.67■□□□□ 0.74
TRUB2O95900 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.67■□□□□ 0.74
TRUB2O95900 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.67■□□□□ 0.74
TRUB2O95900 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.67■□□□□ 0.74
TRUB2O95900 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRUB2O95900 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.67■□□□□ 0.74
TRUB2O95900 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.67■□□□□ 0.74
TRUB2O95900 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRUB2O95900 RNF165-205ENST00000588679 2904 ntBASIC19.67■□□□□ 0.74
TRUB2O95900 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRUB2O95900 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRUB2O95900 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRUB2O95900 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.66■□□□□ 0.74
TRUB2O95900 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
TRUB2O95900 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRUB2O95900 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRUB2O95900 HEIH-201ENST00000623091 1652 ntBASIC19.66■□□□□ 0.74
TRUB2O95900 ANO7L1-203ENST00000602586 1720 ntBASIC19.66■□□□□ 0.74
TRUB2O95900 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRUB2O95900 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRUB2O95900 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRUB2O95900 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRUB2O95900 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.66■□□□□ 0.74
TRUB2O95900 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.66■□□□□ 0.74
TRUB2O95900 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.66■□□□□ 0.74
TRUB2O95900 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.66■□□□□ 0.74
TRUB2O95900 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.66■□□□□ 0.74
TRUB2O95900 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.66■□□□□ 0.74
TRUB2O95900 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.66■□□□□ 0.74
TRUB2O95900 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRUB2O95900 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRUB2O95900 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRUB2O95900 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRUB2O95900 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRUB2O95900 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRUB2O95900 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRUB2O95900 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRUB2O95900 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRUB2O95900 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRUB2O95900 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.65■□□□□ 0.74
TRUB2O95900 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
TRUB2O95900 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRUB2O95900 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.65■□□□□ 0.74
TRUB2O95900 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.65■□□□□ 0.74
TRUB2O95900 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.65■□□□□ 0.74
TRUB2O95900 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.65■□□□□ 0.74
TRUB2O95900 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
TRUB2O95900 AC068587.9-201ENST00000641814 219 ntBASIC19.65■□□□□ 0.74
TRUB2O95900 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRUB2O95900 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms