Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CDRT1O95170 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDRT1O95170 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CDRT1O95170 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDRT1O95170 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDRT1O95170 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.77■□□□□ 0.27
CDRT1O95170 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.77■□□□□ 0.27
CDRT1O95170 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.77■□□□□ 0.27
CDRT1O95170 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDRT1O95170 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDRT1O95170 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDRT1O95170 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDRT1O95170 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDRT1O95170 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDRT1O95170 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDRT1O95170 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDRT1O95170 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDRT1O95170 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDRT1O95170 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDRT1O95170 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDRT1O95170 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDRT1O95170 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.76■□□□□ 0.27
CDRT1O95170 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDRT1O95170 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
CDRT1O95170 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.76■□□□□ 0.27
CDRT1O95170 AL162430.1-201ENST00000480705 870 ntBASIC16.76■□□□□ 0.27
CDRT1O95170 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.76■□□□□ 0.27
CDRT1O95170 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.76■□□□□ 0.27
CDRT1O95170 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.76■□□□□ 0.27
CDRT1O95170 AC005181.1-201ENST00000604782 1256 ntBASIC16.76■□□□□ 0.27
CDRT1O95170 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.76■□□□□ 0.27
CDRT1O95170 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.76■□□□□ 0.27
CDRT1O95170 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.76■□□□□ 0.27
CDRT1O95170 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.76■□□□□ 0.27
CDRT1O95170 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.76■□□□□ 0.27
CDRT1O95170 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.76■□□□□ 0.27
CDRT1O95170 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDRT1O95170 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CDRT1O95170 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDRT1O95170 TFP1-202ENST00000475455 1573 ntBASIC16.76■□□□□ 0.27
CDRT1O95170 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDRT1O95170 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDRT1O95170 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDRT1O95170 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDRT1O95170 GNAS-203ENST00000306120 1878 ntBASIC16.76■□□□□ 0.27
CDRT1O95170 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDRT1O95170 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.75■□□□□ 0.27
CDRT1O95170 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDRT1O95170 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.75■□□□□ 0.27
CDRT1O95170 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.75■□□□□ 0.27
CDRT1O95170 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDRT1O95170 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDRT1O95170 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDRT1O95170 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CDRT1O95170 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDRT1O95170 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDRT1O95170 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDRT1O95170 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CDRT1O95170 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.75■□□□□ 0.27
CDRT1O95170 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDRT1O95170 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDRT1O95170 LSM12P1-201ENST00000411836 588 ntBASIC16.75■□□□□ 0.27
CDRT1O95170 AC004911.1-201ENST00000416316 871 ntBASIC16.75■□□□□ 0.27
CDRT1O95170 AL512625.2-201ENST00000417533 625 ntBASIC16.75■□□□□ 0.27
CDRT1O95170 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDRT1O95170 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.75■□□□□ 0.27
CDRT1O95170 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDRT1O95170 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.75■□□□□ 0.27
CDRT1O95170 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDRT1O95170 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CDRT1O95170 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDRT1O95170 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDRT1O95170 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDRT1O95170 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDRT1O95170 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDRT1O95170 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDRT1O95170 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.75■□□□□ 0.27
CDRT1O95170 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.75■□□□□ 0.27
CDRT1O95170 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDRT1O95170 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CDRT1O95170 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CDRT1O95170 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDRT1O95170 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDRT1O95170 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDRT1O95170 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.74■□□□□ 0.27
CDRT1O95170 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDRT1O95170 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDRT1O95170 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDRT1O95170 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDRT1O95170 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDRT1O95170 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDRT1O95170 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDRT1O95170 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.74■□□□□ 0.27
CDRT1O95170 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDRT1O95170 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.74■□□□□ 0.27
CDRT1O95170 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.74■□□□□ 0.27
CDRT1O95170 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.74■□□□□ 0.27
CDRT1O95170 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.74■□□□□ 0.27
CDRT1O95170 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.74■□□□□ 0.27
CDRT1O95170 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms