Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP1O94782 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP1O94782 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
USP1O94782 PRSS44-201ENST00000515154 1146 ntBASIC19.02■□□□□ 0.64
USP1O94782 C1QBPP2-201ENST00000528754 825 ntBASIC19.02■□□□□ 0.64
USP1O94782 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
USP1O94782 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.02■□□□□ 0.64
USP1O94782 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.02■□□□□ 0.64
USP1O94782 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP1O94782 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
USP1O94782 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP1O94782 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
USP1O94782 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
USP1O94782 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
USP1O94782 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP1O94782 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP1O94782 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.01■□□□□ 0.63
USP1O94782 HEIH-201ENST00000623091 1652 ntBASIC19.01■□□□□ 0.63
USP1O94782 HTR7P1-201ENST00000538670 1336 ntBASIC19.01■□□□□ 0.63
USP1O94782 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP1O94782 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.01■□□□□ 0.63
USP1O94782 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP1O94782 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP1O94782 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP1O94782 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP1O94782 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP1O94782 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP1O94782 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.01■□□□□ 0.63
USP1O94782 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP1O94782 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.01■□□□□ 0.63
USP1O94782 KSR1P1-201ENST00000446298 240 ntBASIC19.01■□□□□ 0.63
USP1O94782 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.01■□□□□ 0.63
USP1O94782 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.01■□□□□ 0.63
USP1O94782 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.01■□□□□ 0.63
USP1O94782 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.01■□□□□ 0.63
USP1O94782 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.01■□□□□ 0.63
USP1O94782 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
USP1O94782 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP1O94782 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.01■□□□□ 0.63
USP1O94782 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.01■□□□□ 0.63
USP1O94782 RCC2P6-201ENST00000526625 1557 ntBASIC19.01■□□□□ 0.63
USP1O94782 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
USP1O94782 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP1O94782 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP1O94782 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.01■□□□□ 0.63
USP1O94782 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19■□□□□ 0.63
USP1O94782 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19■□□□□ 0.63
USP1O94782 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
USP1O94782 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19■□□□□ 0.63
USP1O94782 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP1O94782 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
USP1O94782 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
USP1O94782 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
USP1O94782 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP1O94782 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19■□□□□ 0.63
USP1O94782 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
USP1O94782 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP1O94782 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
USP1O94782 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP1O94782 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19■□□□□ 0.63
USP1O94782 AL353807.1-201ENST00000427475 662 ntBASIC19■□□□□ 0.63
USP1O94782 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
USP1O94782 AP002982.1-201ENST00000492365 877 ntBASIC19■□□□□ 0.63
USP1O94782 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19■□□□□ 0.63
USP1O94782 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
USP1O94782 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP1O94782 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19■□□□□ 0.63
USP1O94782 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP1O94782 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19■□□□□ 0.63
USP1O94782 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP1O94782 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
USP1O94782 AL133373.2-201ENST00000623187 2828 ntBASIC19■□□□□ 0.63
USP1O94782 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP1O94782 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
USP1O94782 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP1O94782 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP1O94782 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
USP1O94782 PCDHB18P-201ENST00000524813 2368 ntBASIC18.99■□□□□ 0.63
USP1O94782 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.99■□□□□ 0.63
USP1O94782 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.99■□□□□ 0.63
USP1O94782 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
USP1O94782 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP1O94782 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.99■□□□□ 0.63
USP1O94782 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP1O94782 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP1O94782 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP1O94782 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.99■□□□□ 0.63
USP1O94782 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP1O94782 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP1O94782 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP1O94782 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP1O94782 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.99■□□□□ 0.63
USP1O94782 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP1O94782 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP1O94782 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP1O94782 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.99■□□□□ 0.63
USP1O94782 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP1O94782 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
USP1O94782 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.98■□□□□ 0.63
USP1O94782 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms