Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CNOT3O75175 AC093484.2-201ENST00000580996 2166 ntBASIC18.21■□□□□ 0.51
CNOT3O75175 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNOT3O75175 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
CNOT3O75175 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CNOT3O75175 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNOT3O75175 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.21■□□□□ 0.51
CNOT3O75175 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNOT3O75175 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.21■□□□□ 0.51
CNOT3O75175 INGX-201ENST00000359239 846 ntBASIC18.21■□□□□ 0.51
CNOT3O75175 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CNOT3O75175 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.21■□□□□ 0.51
CNOT3O75175 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.21■□□□□ 0.51
CNOT3O75175 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.21■□□□□ 0.51
CNOT3O75175 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.21■□□□□ 0.51
CNOT3O75175 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.21■□□□□ 0.51
CNOT3O75175 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.21■□□□□ 0.51
CNOT3O75175 SLC25A1P4-201ENST00000567977 778 ntBASIC18.21■□□□□ 0.51
CNOT3O75175 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNOT3O75175 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.21■□□□□ 0.51
CNOT3O75175 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.21■□□□□ 0.51
CNOT3O75175 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CNOT3O75175 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.21■□□□□ 0.51
CNOT3O75175 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNOT3O75175 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.21■□□□□ 0.51
CNOT3O75175 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNOT3O75175 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.21■□□□□ 0.5
CNOT3O75175 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
CNOT3O75175 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNOT3O75175 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNOT3O75175 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNOT3O75175 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CNOT3O75175 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNOT3O75175 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CNOT3O75175 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNOT3O75175 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
CNOT3O75175 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.2■□□□□ 0.5
CNOT3O75175 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNOT3O75175 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.2■□□□□ 0.5
CNOT3O75175 AC113347.1-201ENST00000413321 391 ntBASIC18.2■□□□□ 0.5
CNOT3O75175 KRT18P57-201ENST00000443599 1254 ntBASIC18.2■□□□□ 0.5
CNOT3O75175 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CNOT3O75175 AL160286.2-201ENST00000567150 934 ntBASIC18.2■□□□□ 0.5
CNOT3O75175 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNOT3O75175 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CNOT3O75175 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNOT3O75175 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.2■□□□□ 0.5
CNOT3O75175 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CNOT3O75175 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CNOT3O75175 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CNOT3O75175 KRT18P22-201ENST00000402024 1347 ntBASIC18.2■□□□□ 0.5
CNOT3O75175 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNOT3O75175 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CNOT3O75175 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNOT3O75175 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNOT3O75175 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNOT3O75175 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.19■□□□□ 0.5
CNOT3O75175 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNOT3O75175 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNOT3O75175 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.19■□□□□ 0.5
CNOT3O75175 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNOT3O75175 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.19■□□□□ 0.5
CNOT3O75175 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNOT3O75175 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNOT3O75175 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNOT3O75175 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
CNOT3O75175 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.19■□□□□ 0.5
CNOT3O75175 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNOT3O75175 FAM207BP-201ENST00000447172 505 ntBASIC18.19■□□□□ 0.5
CNOT3O75175 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.19■□□□□ 0.5
CNOT3O75175 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.19■□□□□ 0.5
CNOT3O75175 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.19■□□□□ 0.5
CNOT3O75175 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.19■□□□□ 0.5
CNOT3O75175 AC073508.3-201ENST00000619697 1419 ntBASIC18.19■□□□□ 0.5
CNOT3O75175 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNOT3O75175 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNOT3O75175 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNOT3O75175 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNOT3O75175 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.19■□□□□ 0.5
CNOT3O75175 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.19■□□□□ 0.5
CNOT3O75175 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.19■□□□□ 0.5
CNOT3O75175 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CNOT3O75175 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNOT3O75175 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.18■□□□□ 0.5
CNOT3O75175 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.18■□□□□ 0.5
CNOT3O75175 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNOT3O75175 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNOT3O75175 AL049812.1-201ENST00000432563 2267 ntBASIC18.18■□□□□ 0.5
CNOT3O75175 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.18■□□□□ 0.5
CNOT3O75175 TSPY14P-201ENST00000303979 915 ntBASIC18.18■□□□□ 0.5
CNOT3O75175 TERF1P1-201ENST00000311003 1181 ntBASIC18.18■□□□□ 0.5
CNOT3O75175 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNOT3O75175 SLC25A3P1-201ENST00000443844 931 ntBASIC18.18■□□□□ 0.5
CNOT3O75175 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.18■□□□□ 0.5
CNOT3O75175 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CNOT3O75175 AC092865.7-201ENST00000641832 219 ntBASIC18.18■□□□□ 0.5
CNOT3O75175 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNOT3O75175 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.18■□□□□ 0.5
CNOT3O75175 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.18■□□□□ 0.5
CNOT3O75175 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms