Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.75■□□□□ 0.27
TRAF3IP2O43734 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAF3IP2O43734 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.74■□□□□ 0.27
TRAF3IP2O43734 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 ANO7L1-203ENST00000602586 1720 ntBASIC16.74■□□□□ 0.27
TRAF3IP2O43734 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAF3IP2O43734 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP2O43734 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP2O43734 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP2O43734 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRAF3IP2O43734 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAF3IP2O43734 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP2O43734 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAF3IP2O43734 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAF3IP2O43734 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP2O43734 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP2O43734 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP2O43734 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAF3IP2O43734 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRAF3IP2O43734 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP2O43734 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAF3IP2O43734 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 AL023284.2-201ENST00000405850 579 ntBASIC16.72■□□□□ 0.27
TRAF3IP2O43734 SLC25A1P2-201ENST00000430693 912 ntBASIC16.72■□□□□ 0.27
TRAF3IP2O43734 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 AL023803.3-201ENST00000615559 522 ntBASIC16.72■□□□□ 0.27
TRAF3IP2O43734 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 GPAT2P1-201ENST00000444924 1672 ntBASIC16.72■□□□□ 0.27
TRAF3IP2O43734 AL109659.2-201ENST00000606809 1674 ntBASIC16.72■□□□□ 0.27
TRAF3IP2O43734 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAF3IP2O43734 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 MIR4674-201ENST00000582457 87 ntBASIC16.71■□□□□ 0.27
TRAF3IP2O43734 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.71■□□□□ 0.27
TRAF3IP2O43734 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms