Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.97■□□□□ 0.79
SOX1O00570 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SOX1O00570 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SOX1O00570 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.97■□□□□ 0.79
SOX1O00570 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SOX1O00570 AC092474.2-201ENST00000424288 719 ntBASIC19.97■□□□□ 0.79
SOX1O00570 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SOX1O00570 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SOX1O00570 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.97■□□□□ 0.79
SOX1O00570 ALG1L5P-201ENST00000482043 771 ntBASIC19.97■□□□□ 0.79
SOX1O00570 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SOX1O00570 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.97■□□□□ 0.79
SOX1O00570 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.97■□□□□ 0.79
SOX1O00570 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.97■□□□□ 0.79
SOX1O00570 AC104390.1-201ENST00000555663 520 ntBASIC19.97■□□□□ 0.79
SOX1O00570 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.97■□□□□ 0.79
SOX1O00570 AC138761.1-201ENST00000584393 385 ntBASIC19.97■□□□□ 0.79
SOX1O00570 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.97■□□□□ 0.79
SOX1O00570 AC005336.2-201ENST00000593183 939 ntBASIC19.97■□□□□ 0.79
SOX1O00570 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.97■□□□□ 0.79
SOX1O00570 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SOX1O00570 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.97■□□□□ 0.79
SOX1O00570 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.97■□□□□ 0.79
SOX1O00570 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SOX1O00570 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SOX1O00570 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SOX1O00570 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SOX1O00570 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SOX1O00570 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SOX1O00570 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SOX1O00570 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SOX1O00570 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SOX1O00570 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SOX1O00570 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.96■□□□□ 0.79
SOX1O00570 AC005034.1-201ENST00000426657 489 ntBASIC19.96■□□□□ 0.79
SOX1O00570 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.96■□□□□ 0.79
SOX1O00570 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.96■□□□□ 0.79
SOX1O00570 OR7E14P-202ENST00000530490 1290 ntBASIC19.96■□□□□ 0.79
SOX1O00570 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.96■□□□□ 0.79
SOX1O00570 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.96■□□□□ 0.79
SOX1O00570 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SOX1O00570 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SOX1O00570 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.96■□□□□ 0.79
SOX1O00570 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SOX1O00570 Z98882.1-201ENST00000622160 2253 ntBASIC19.96■□□□□ 0.79
SOX1O00570 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SOX1O00570 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SOX1O00570 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.95■□□□□ 0.78
SOX1O00570 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SOX1O00570 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SOX1O00570 CNN2P11-201ENST00000429351 262 ntBASIC19.95■□□□□ 0.78
SOX1O00570 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.95■□□□□ 0.78
SOX1O00570 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.95■□□□□ 0.78
SOX1O00570 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.95■□□□□ 0.78
SOX1O00570 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.95■□□□□ 0.78
SOX1O00570 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.95■□□□□ 0.78
SOX1O00570 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.95■□□□□ 0.78
SOX1O00570 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.95■□□□□ 0.78
SOX1O00570 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.95■□□□□ 0.78
SOX1O00570 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SOX1O00570 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SOX1O00570 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SOX1O00570 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SOX1O00570 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SOX1O00570 AP001271.2-201ENST00000624018 1556 ntBASIC19.95■□□□□ 0.78
SOX1O00570 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SOX1O00570 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.95■□□□□ 0.78
SOX1O00570 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.95■□□□□ 0.78
SOX1O00570 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SOX1O00570 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SOX1O00570 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.94■□□□□ 0.78
SOX1O00570 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX1O00570 SMG8-203ENST00000578922 2178 ntBASIC19.94■□□□□ 0.78
SOX1O00570 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SOX1O00570 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX1O00570 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX1O00570 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SOX1O00570 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.94■□□□□ 0.78
SOX1O00570 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.94■□□□□ 0.78
SOX1O00570 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.94■□□□□ 0.78
SOX1O00570 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.94■□□□□ 0.78
SOX1O00570 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.94■□□□□ 0.78
SOX1O00570 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX1O00570 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX1O00570 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.93■□□□□ 0.78
SOX1O00570 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX1O00570 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX1O00570 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SOX1O00570 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX1O00570 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX1O00570 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SOX1O00570 AC244015.2-201ENST00000616358 1861 ntBASIC19.93■□□□□ 0.78
SOX1O00570 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX1O00570 PKD1P6-201ENST00000343738 4769 ntBASIC19.93■□□□□ 0.78
SOX1O00570 GK-202ENST00000378941 458 ntTSL 3 BASIC19.93■□□□□ 0.78
SOX1O00570 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.93■□□□□ 0.78
SOX1O00570 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.93■□□□□ 0.78
SOX1O00570 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.93■□□□□ 0.78
SOX1O00570 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
SOX1O00570 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms