Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTCAO00442 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTCAO00442 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.92■□□□□ 0.46
RTCAO00442 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
RTCAO00442 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTCAO00442 AC093525.10-201ENST00000625130 1569 ntBASIC17.92■□□□□ 0.46
RTCAO00442 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.92■□□□□ 0.46
RTCAO00442 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.92■□□□□ 0.46
RTCAO00442 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTCAO00442 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RTCAO00442 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTCAO00442 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTCAO00442 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTCAO00442 AP005242.2-201ENST00000580065 1175 ntBASIC17.92■□□□□ 0.46
RTCAO00442 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
RTCAO00442 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTCAO00442 KRT8P32-201ENST00000512863 1461 ntBASIC17.92■□□□□ 0.46
RTCAO00442 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTCAO00442 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTCAO00442 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTCAO00442 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTCAO00442 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.92■□□□□ 0.46
RTCAO00442 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTCAO00442 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTCAO00442 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTCAO00442 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTCAO00442 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTCAO00442 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTCAO00442 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTCAO00442 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.91■□□□□ 0.46
RTCAO00442 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.91■□□□□ 0.46
RTCAO00442 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTCAO00442 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTCAO00442 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTCAO00442 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTCAO00442 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTCAO00442 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTCAO00442 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTCAO00442 FITM1-202ENST00000559294 800 ntBASIC17.91■□□□□ 0.46
RTCAO00442 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.91■□□□□ 0.46
RTCAO00442 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTCAO00442 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
RTCAO00442 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.91■□□□□ 0.46
RTCAO00442 RCC2P3-201ENST00000418112 1537 ntBASIC17.91■□□□□ 0.46
RTCAO00442 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
RTCAO00442 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTCAO00442 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RTCAO00442 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTCAO00442 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTCAO00442 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RTCAO00442 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTCAO00442 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTCAO00442 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTCAO00442 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.9■□□□□ 0.46
RTCAO00442 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
RTCAO00442 KRT8P9-201ENST00000558927 1449 ntBASIC17.9■□□□□ 0.46
RTCAO00442 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RTCAO00442 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.9■□□□□ 0.46
RTCAO00442 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTCAO00442 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.9■□□□□ 0.46
RTCAO00442 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTCAO00442 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTCAO00442 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTCAO00442 ANO7L1-203ENST00000602586 1720 ntBASIC17.9■□□□□ 0.46
RTCAO00442 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTCAO00442 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.9■□□□□ 0.46
RTCAO00442 Z98044.1-201ENST00000632503 1764 ntBASIC17.9■□□□□ 0.46
RTCAO00442 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTCAO00442 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.9■□□□□ 0.46
RTCAO00442 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTCAO00442 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.9■□□□□ 0.46
RTCAO00442 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTCAO00442 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTCAO00442 AC068587.9-201ENST00000641814 219 ntBASIC17.9■□□□□ 0.46
RTCAO00442 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RTCAO00442 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.9■□□□□ 0.46
RTCAO00442 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
RTCAO00442 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTCAO00442 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTCAO00442 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTCAO00442 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.9■□□□□ 0.46
RTCAO00442 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RTCAO00442 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RTCAO00442 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.89■□□□□ 0.46
RTCAO00442 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.89■□□□□ 0.46
RTCAO00442 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RTCAO00442 AC104581.1-202ENST00000635932 2618 ntBASIC17.89■□□□□ 0.46
RTCAO00442 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RTCAO00442 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTCAO00442 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.89■□□□□ 0.45
RTCAO00442 MTMR9LP-203ENST00000426597 1545 ntBASIC17.89■□□□□ 0.45
RTCAO00442 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.89■□□□□ 0.45
RTCAO00442 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTCAO00442 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTCAO00442 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.89■□□□□ 0.45
RTCAO00442 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RTCAO00442 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RTCAO00442 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
RTCAO00442 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.89■□□□□ 0.45
RTCAO00442 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms