Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RGPD3A6NKT7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.8■■□□□ 1.4
RGPD3A6NKT7 TREX1-205ENST00000625293 1783 ntBASIC23.8■■□□□ 1.4
RGPD3A6NKT7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RGPD3A6NKT7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.8■■□□□ 1.4
RGPD3A6NKT7 AC034236.2-201ENST00000606662 1610 ntBASIC23.8■■□□□ 1.4
RGPD3A6NKT7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RGPD3A6NKT7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
RGPD3A6NKT7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.8■■□□□ 1.4
RGPD3A6NKT7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC23.8■■□□□ 1.4
RGPD3A6NKT7 AL035633.1-201ENST00000406139 838 ntBASIC23.8■■□□□ 1.4
RGPD3A6NKT7 RNA5SP416-201ENST00000516838 111 ntBASIC23.8■■□□□ 1.4
RGPD3A6NKT7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC23.8■■□□□ 1.4
RGPD3A6NKT7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC23.8■■□□□ 1.4
RGPD3A6NKT7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
RGPD3A6NKT7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RGPD3A6NKT7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RGPD3A6NKT7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RGPD3A6NKT7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
RGPD3A6NKT7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC23.79■■□□□ 1.4
RGPD3A6NKT7 OR7E14P-202ENST00000530490 1290 ntBASIC23.79■■□□□ 1.4
RGPD3A6NKT7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC23.79■■□□□ 1.4
RGPD3A6NKT7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RGPD3A6NKT7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RGPD3A6NKT7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RGPD3A6NKT7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RGPD3A6NKT7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RGPD3A6NKT7 KATNBL1P6-202ENST00000562413 1466 ntBASIC23.79■■□□□ 1.4
RGPD3A6NKT7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC23.79■■□□□ 1.4
RGPD3A6NKT7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC23.79■■□□□ 1.4
RGPD3A6NKT7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
RGPD3A6NKT7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
RGPD3A6NKT7 RPS2P1-201ENST00000434010 821 ntBASIC23.78■■□□□ 1.4
RGPD3A6NKT7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC23.78■■□□□ 1.4
RGPD3A6NKT7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC23.78■■□□□ 1.4
RGPD3A6NKT7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC23.78■■□□□ 1.4
RGPD3A6NKT7 AL139288.1-201ENST00000623748 933 ntBASIC23.78■■□□□ 1.4
RGPD3A6NKT7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RGPD3A6NKT7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RGPD3A6NKT7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RGPD3A6NKT7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
RGPD3A6NKT7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RGPD3A6NKT7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
RGPD3A6NKT7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
RGPD3A6NKT7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
RGPD3A6NKT7 AC092910.1-201ENST00000482027 1129 ntBASIC23.78■■□□□ 1.4
RGPD3A6NKT7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
RGPD3A6NKT7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC23.78■■□□□ 1.4
RGPD3A6NKT7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RGPD3A6NKT7 CYP51A1P1-201ENST00000492267 1507 ntBASIC23.78■■□□□ 1.4
RGPD3A6NKT7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RGPD3A6NKT7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RGPD3A6NKT7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC23.77■■□□□ 1.4
RGPD3A6NKT7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RGPD3A6NKT7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RGPD3A6NKT7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.77■■□□□ 1.4
RGPD3A6NKT7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC23.77■■□□□ 1.4
RGPD3A6NKT7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RGPD3A6NKT7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.77■■□□□ 1.4
RGPD3A6NKT7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
RGPD3A6NKT7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RGPD3A6NKT7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RGPD3A6NKT7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC23.77■■□□□ 1.4
RGPD3A6NKT7 AC007967.2-201ENST00000432613 625 ntBASIC23.77■■□□□ 1.4
RGPD3A6NKT7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.77■■□□□ 1.4
RGPD3A6NKT7 HLA-J-201ENST00000462773 1622 ntBASIC23.77■■□□□ 1.4
RGPD3A6NKT7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RGPD3A6NKT7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RGPD3A6NKT7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RGPD3A6NKT7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RGPD3A6NKT7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RGPD3A6NKT7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RGPD3A6NKT7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC23.76■■□□□ 1.39
RGPD3A6NKT7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
RGPD3A6NKT7 CALY-203ENST00000368558 825 ntTSL 5 BASIC23.76■■□□□ 1.39
RGPD3A6NKT7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC23.76■■□□□ 1.39
RGPD3A6NKT7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC23.76■■□□□ 1.39
RGPD3A6NKT7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC23.76■■□□□ 1.39
RGPD3A6NKT7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC23.76■■□□□ 1.39
RGPD3A6NKT7 ALG1L5P-201ENST00000482043 771 ntBASIC23.76■■□□□ 1.39
RGPD3A6NKT7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RGPD3A6NKT7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC23.76■■□□□ 1.39
RGPD3A6NKT7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC23.76■■□□□ 1.39
RGPD3A6NKT7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC23.76■■□□□ 1.39
RGPD3A6NKT7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC23.76■■□□□ 1.39
RGPD3A6NKT7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC23.76■■□□□ 1.39
RGPD3A6NKT7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.76■■□□□ 1.39
RGPD3A6NKT7 AC112777.1-201ENST00000540175 1423 ntBASIC23.76■■□□□ 1.39
RGPD3A6NKT7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RGPD3A6NKT7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RGPD3A6NKT7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
RGPD3A6NKT7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RGPD3A6NKT7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RGPD3A6NKT7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC23.75■■□□□ 1.39
RGPD3A6NKT7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC23.75■■□□□ 1.39
RGPD3A6NKT7 HTR5BP-201ENST00000430851 1154 ntBASIC23.75■■□□□ 1.39
RGPD3A6NKT7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC23.75■■□□□ 1.39
RGPD3A6NKT7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC23.75■■□□□ 1.39
RGPD3A6NKT7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RGPD3A6NKT7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms