Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TBC1D3BA6NDS4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TBC1D3BA6NDS4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TBC1D3BA6NDS4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
TBC1D3BA6NDS4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
TBC1D3BA6NDS4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
TBC1D3BA6NDS4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TBC1D3BA6NDS4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TBC1D3BA6NDS4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.08■□□□□ 0.65
TBC1D3BA6NDS4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TBC1D3BA6NDS4 AL450487.1-201ENST00000426799 995 ntBASIC19.08■□□□□ 0.64
TBC1D3BA6NDS4 KRT18P23-201ENST00000435622 1283 ntBASIC19.08■□□□□ 0.64
TBC1D3BA6NDS4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TBC1D3BA6NDS4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.08■□□□□ 0.64
TBC1D3BA6NDS4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.08■□□□□ 0.64
TBC1D3BA6NDS4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.08■□□□□ 0.64
TBC1D3BA6NDS4 MIR3917-201ENST00000580971 93 ntBASIC19.08■□□□□ 0.64
TBC1D3BA6NDS4 AL121894.2-201ENST00000602977 491 ntBASIC19.08■□□□□ 0.64
TBC1D3BA6NDS4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TBC1D3BA6NDS4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.08■□□□□ 0.64
TBC1D3BA6NDS4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TBC1D3BA6NDS4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TBC1D3BA6NDS4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 BX276092.5-203ENST00000456199 560 ntBASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 AC092119.3-201ENST00000612618 583 ntBASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 AC079602.3-201ENST00000623931 403 ntBASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D3BA6NDS4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 AL121672.3-201ENST00000608644 468 ntBASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 IRX1P1-201ENST00000438849 1838 ntBASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 KRT8P7-201ENST00000533003 1432 ntBASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.06■□□□□ 0.64
TBC1D3BA6NDS4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.05■□□□□ 0.64
TBC1D3BA6NDS4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TBC1D3BA6NDS4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D3BA6NDS4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D3BA6NDS4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
TBC1D3BA6NDS4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D3BA6NDS4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D3BA6NDS4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D3BA6NDS4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.05■□□□□ 0.64
TBC1D3BA6NDS4 TSSC2-201ENST00000450217 709 ntBASIC19.05■□□□□ 0.64
TBC1D3BA6NDS4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.05■□□□□ 0.64
TBC1D3BA6NDS4 AC092329.2-201ENST00000598402 547 ntBASIC19.05■□□□□ 0.64
TBC1D3BA6NDS4 AL136038.4-201ENST00000603606 1261 ntBASIC19.05■□□□□ 0.64
TBC1D3BA6NDS4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.05■□□□□ 0.64
TBC1D3BA6NDS4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms