Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 RBM17P1-201ENST00000453646 1190 ntBASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 AC020916.1-201ENST00000587762 1774 ntBASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 ANO7L1-203ENST00000602586 1720 ntBASIC18.8■□□□□ 0.6
CCDC162PA2VCL2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 AC008622.2-201ENST00000617006 1229 ntBASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 MTMR9LP-203ENST00000426597 1545 ntBASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.79■□□□□ 0.6
CCDC162PA2VCL2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC162PA2VCL2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 AC079598.2-202ENST00000546624 1451 ntBASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 AP000525.1-201ENST00000608286 694 ntBASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 RCC2P3-201ENST00000418112 1537 ntBASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 WIZP1-201ENST00000531444 2299 ntBASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms