Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 AC067852.2-201ENST00000590513 2313 ntBASIC20.31■□□□□ 0.84
CCDC66A2RUB6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 AC083906.2-201ENST00000511578 360 ntBASIC20.31■□□□□ 0.84
CCDC66A2RUB6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 AL391005.1-201ENST00000623953 2435 ntBASIC20.3■□□□□ 0.84
CCDC66A2RUB6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 SIRPAP1-201ENST00000448467 1770 ntBASIC20.3■□□□□ 0.84
CCDC66A2RUB6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 AC084018.2-201ENST00000613093 2607 ntBASIC20.3■□□□□ 0.84
CCDC66A2RUB6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.3■□□□□ 0.84
CCDC66A2RUB6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC66A2RUB6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 AP006587.1-201ENST00000534129 1502 ntBASIC20.29■□□□□ 0.84
CCDC66A2RUB6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 YBX1P10-201ENST00000444752 975 ntBASIC20.29■□□□□ 0.84
CCDC66A2RUB6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 AL121906.2-201ENST00000621597 723 ntBASIC20.29■□□□□ 0.84
CCDC66A2RUB6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC66A2RUB6 AC104417.2-201ENST00000562989 1793 ntBASIC20.29■□□□□ 0.84
CCDC66A2RUB6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC66A2RUB6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms