Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 MIR7706-201ENST00000613747 67 ntBASIC21.9■■□□□ 1.1
SSC5DA1L4H1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
SSC5DA1L4H1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SSC5DA1L4H1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SSC5DA1L4H1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SSC5DA1L4H1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
SSC5DA1L4H1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SSC5DA1L4H1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
SSC5DA1L4H1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.89■■□□□ 1.1
SSC5DA1L4H1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
SSC5DA1L4H1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SSC5DA1L4H1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SSC5DA1L4H1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.89■■□□□ 1.09
SSC5DA1L4H1 AC034236.2-201ENST00000606662 1610 ntBASIC21.89■■□□□ 1.09
SSC5DA1L4H1 TREX1-205ENST00000625293 1783 ntBASIC21.89■■□□□ 1.09
SSC5DA1L4H1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SSC5DA1L4H1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.89■■□□□ 1.09
SSC5DA1L4H1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.89■■□□□ 1.09
SSC5DA1L4H1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SSC5DA1L4H1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SSC5DA1L4H1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SSC5DA1L4H1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SSC5DA1L4H1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SSC5DA1L4H1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SSC5DA1L4H1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SSC5DA1L4H1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SSC5DA1L4H1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.88■■□□□ 1.09
SSC5DA1L4H1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.88■■□□□ 1.09
SSC5DA1L4H1 AC024563.2-201ENST00000603282 481 ntBASIC21.88■■□□□ 1.09
SSC5DA1L4H1 AC148477.8-201ENST00000624298 468 ntBASIC21.88■■□□□ 1.09
SSC5DA1L4H1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.88■■□□□ 1.09
SSC5DA1L4H1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SSC5DA1L4H1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
SSC5DA1L4H1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SSC5DA1L4H1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SSC5DA1L4H1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SSC5DA1L4H1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SSC5DA1L4H1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SSC5DA1L4H1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SSC5DA1L4H1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.87■■□□□ 1.09
SSC5DA1L4H1 AL773604.1-201ENST00000617417 272 ntBASIC21.87■■□□□ 1.09
SSC5DA1L4H1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SSC5DA1L4H1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SSC5DA1L4H1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SSC5DA1L4H1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SSC5DA1L4H1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SSC5DA1L4H1 AC243591.1-201ENST00000452967 1364 ntBASIC21.87■■□□□ 1.09
SSC5DA1L4H1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SSC5DA1L4H1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.87■■□□□ 1.09
SSC5DA1L4H1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.87■■□□□ 1.09
SSC5DA1L4H1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.87■■□□□ 1.09
SSC5DA1L4H1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.87■■□□□ 1.09
SSC5DA1L4H1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.87■■□□□ 1.09
SSC5DA1L4H1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC21.87■■□□□ 1.09
SSC5DA1L4H1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.87■■□□□ 1.09
SSC5DA1L4H1 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.87■■□□□ 1.09
SSC5DA1L4H1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.87■■□□□ 1.09
SSC5DA1L4H1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SSC5DA1L4H1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.86■■□□□ 1.09
SSC5DA1L4H1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SSC5DA1L4H1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SSC5DA1L4H1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SSC5DA1L4H1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SSC5DA1L4H1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
SSC5DA1L4H1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.86■■□□□ 1.09
SSC5DA1L4H1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
SSC5DA1L4H1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SSC5DA1L4H1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
SSC5DA1L4H1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.86■■□□□ 1.09
SSC5DA1L4H1 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.86■■□□□ 1.09
SSC5DA1L4H1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SSC5DA1L4H1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SSC5DA1L4H1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SSC5DA1L4H1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SSC5DA1L4H1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.86■■□□□ 1.09
SSC5DA1L4H1 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.85■■□□□ 1.09
SSC5DA1L4H1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SSC5DA1L4H1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SSC5DA1L4H1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SSC5DA1L4H1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SSC5DA1L4H1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.85■■□□□ 1.09
SSC5DA1L4H1 AL353692.3-201ENST00000407031 1396 ntBASIC21.85■■□□□ 1.09
SSC5DA1L4H1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SSC5DA1L4H1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SSC5DA1L4H1 GUSBP12-201ENST00000513727 720 ntBASIC21.85■■□□□ 1.09
SSC5DA1L4H1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.85■■□□□ 1.09
SSC5DA1L4H1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SSC5DA1L4H1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.85■■□□□ 1.09
SSC5DA1L4H1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.85■■□□□ 1.09
SSC5DA1L4H1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.85■■□□□ 1.09
SSC5DA1L4H1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SSC5DA1L4H1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SSC5DA1L4H1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSC5DA1L4H1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSC5DA1L4H1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.84■■□□□ 1.09
SSC5DA1L4H1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSC5DA1L4H1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSC5DA1L4H1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.84■■□□□ 1.09
SSC5DA1L4H1 KRT18P67-201ENST00000432816 1264 ntBASIC21.84■■□□□ 1.09
SSC5DA1L4H1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms