Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 HLA-L-209ENST00000420110 1011 ntBASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF103-CHMP3A0A140T963 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 POM121L13P-201ENST00000422362 380 ntBASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 UNC93B5-201ENST00000530315 699 ntBASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF103-CHMP3A0A140T963 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 PRKY-204ENST00000533551 1019 ntBASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF103-CHMP3A0A140T963 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms