Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-2A0A0B4J237 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV8-2A0A0B4J237 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-2A0A0B4J237 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-2A0A0B4J237 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-2A0A0B4J237 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-2A0A0B4J237 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV8-2A0A0B4J237 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 AC133681.1-201ENST00000465482 601 ntBASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 RN7SL471P-201ENST00000580476 299 ntBASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TRAV8-2A0A0B4J237 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 POU5F1P3-201ENST00000428824 1078 ntBASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 AL445675.2-201ENST00000620291 557 ntBASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-2A0A0B4J237 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
TRAV8-2A0A0B4J237 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV8-2A0A0B4J237 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-2A0A0B4J237 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV8-2A0A0B4J237 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV8-2A0A0B4J237 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-2A0A0B4J237 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV8-2A0A0B4J237 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-2A0A0B4J237 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV8-2A0A0B4J237 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-2A0A0B4J237 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV8-2A0A0B4J237 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV8-2A0A0B4J237 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-2A0A0B4J237 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-2A0A0B4J237 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV8-2A0A0B4J237 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-2A0A0B4J237 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-2A0A0B4J237 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-2A0A0B4J237 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms