Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX11Q9Y5W9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNX11Q9Y5W9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.63■□□□□ 0.57
SNX11Q9Y5W9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 AC087289.5-201ENST00000586076 3175 ntBASIC18.62■□□□□ 0.57
SNX11Q9Y5W9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 SDHAP1-207ENST00000440850 2000 ntBASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 AC036111.1-201ENST00000533973 1582 ntBASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 MIR3652-201ENST00000579335 131 ntBASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 AC092329.2-201ENST00000598402 547 ntBASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 AC116562.4-201ENST00000641316 2276 ntBASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.61■□□□□ 0.57
SNX11Q9Y5W9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 AL023284.2-201ENST00000405850 579 ntBASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 AC011498.5-201ENST00000592027 486 ntBASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
SNX11Q9Y5W9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNX11Q9Y5W9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNX11Q9Y5W9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SNX11Q9Y5W9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNX11Q9Y5W9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNX11Q9Y5W9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNX11Q9Y5W9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SNX11Q9Y5W9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNX11Q9Y5W9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNX11Q9Y5W9 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNX11Q9Y5W9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNX11Q9Y5W9 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNX11Q9Y5W9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.59■□□□□ 0.57
SNX11Q9Y5W9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SNX11Q9Y5W9 TSSC2-201ENST00000450217 709 ntBASIC18.59■□□□□ 0.57
SNX11Q9Y5W9 PRELID1P1-202ENST00000567272 903 ntBASIC18.59■□□□□ 0.57
SNX11Q9Y5W9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.59■□□□□ 0.57
SNX11Q9Y5W9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNX11Q9Y5W9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms