Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 LIN28AP1-201ENST00000429574 405 ntBASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 IRX1P1-201ENST00000438849 1838 ntBASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 AC141586.3-201ENST00000562166 1838 ntBASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HRH3Q9Y5N1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HRH3Q9Y5N1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 BX323043.1-201ENST00000641006 1765 ntBASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 FP475955.4-201ENST00000623131 1990 ntBASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 TSPY21P-201ENST00000433481 731 ntBASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 ATP5G1P1-201ENST00000448724 379 ntBASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 AC128688.1-201ENST00000487626 519 ntBASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 PRSS44-201ENST00000515154 1146 ntBASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HRH3Q9Y5N1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HRH3Q9Y5N1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HRH3Q9Y5N1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HRH3Q9Y5N1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HRH3Q9Y5N1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.34■□□□□ 0.37
HRH3Q9Y5N1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HRH3Q9Y5N1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HRH3Q9Y5N1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HRH3Q9Y5N1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HRH3Q9Y5N1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HRH3Q9Y5N1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HRH3Q9Y5N1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HRH3Q9Y5N1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms