Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRCH1Q9Y2L9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.46
LRCH1Q9Y2L9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
LRCH1Q9Y2L9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH1Q9Y2L9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
LRCH1Q9Y2L9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH1Q9Y2L9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH1Q9Y2L9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH1Q9Y2L9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.89■□□□□ 0.45
LRCH1Q9Y2L9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH1Q9Y2L9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH1Q9Y2L9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH1Q9Y2L9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LRCH1Q9Y2L9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.89■□□□□ 0.45
LRCH1Q9Y2L9 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH1Q9Y2L9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH1Q9Y2L9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH1Q9Y2L9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.89■□□□□ 0.45
LRCH1Q9Y2L9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH1Q9Y2L9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.89■□□□□ 0.45
LRCH1Q9Y2L9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRCH1Q9Y2L9 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH1Q9Y2L9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH1Q9Y2L9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH1Q9Y2L9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.88■□□□□ 0.45
LRCH1Q9Y2L9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH1Q9Y2L9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH1Q9Y2L9 AL162727.3-201ENST00000635661 2787 ntBASIC17.88■□□□□ 0.45
LRCH1Q9Y2L9 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH1Q9Y2L9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.88■□□□□ 0.45
LRCH1Q9Y2L9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.88■□□□□ 0.45
LRCH1Q9Y2L9 AC079140.4-201ENST00000507448 529 ntBASIC17.88■□□□□ 0.45
LRCH1Q9Y2L9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.88■□□□□ 0.45
LRCH1Q9Y2L9 AC083906.6-201ENST00000641366 219 ntBASIC17.88■□□□□ 0.45
LRCH1Q9Y2L9 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH1Q9Y2L9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
LRCH1Q9Y2L9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRCH1Q9Y2L9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.88■□□□□ 0.45
LRCH1Q9Y2L9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
LRCH1Q9Y2L9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.88■□□□□ 0.45
LRCH1Q9Y2L9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 PHGDH-210ENST00000641115 1638 ntBASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 AC022517.1-201ENST00000592429 346 ntBASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 AC022211.2-201ENST00000585075 2527 ntBASIC17.87■□□□□ 0.45
LRCH1Q9Y2L9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 AL137784.2-201ENST00000607332 1000 ntBASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRCH1Q9Y2L9 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 1293.5 ms