Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HHLA3Q9XRX5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.77□□□□□ -0.21
HHLA3Q9XRX5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HHLA3Q9XRX5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HHLA3Q9XRX5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HHLA3Q9XRX5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
HHLA3Q9XRX5 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.77□□□□□ -0.21
HHLA3Q9XRX5 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HHLA3Q9XRX5 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HHLA3Q9XRX5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
HHLA3Q9XRX5 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HHLA3Q9XRX5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
HHLA3Q9XRX5 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
HHLA3Q9XRX5 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HHLA3Q9XRX5 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HHLA3Q9XRX5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HHLA3Q9XRX5 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HHLA3Q9XRX5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 AC004264.1-201ENST00000608354 794 ntBASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 AC069544.1-201ENST00000609399 999 ntBASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 AC090340.1-201ENST00000620778 4980 ntBASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 Z98044.1-201ENST00000632503 1764 ntBASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.76□□□□□ -0.21
HHLA3Q9XRX5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 NBPF21P-201ENST00000425093 1451 ntBASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 KRT8P8-201ENST00000434750 1448 ntBASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 FAM201B-201ENST00000458407 597 ntBASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 MTDHP1-201ENST00000605323 784 ntBASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 AC006058.3-201ENST00000606217 1069 ntBASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 AC009053.2-201ENST00000563701 2365 ntBASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HHLA3Q9XRX5 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
HHLA3Q9XRX5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms