Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 MIR564-202ENST00000385049 94 ntBASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 AL359075.1-203ENST00000462729 1002 ntBASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 MYC-208ENST00000641036 567 ntBASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBQLN1Q9UMX0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
UBQLN1Q9UMX0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBQLN1Q9UMX0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBQLN1Q9UMX0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBQLN1Q9UMX0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBQLN1Q9UMX0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBQLN1Q9UMX0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBQLN1Q9UMX0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBQLN1Q9UMX0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.17■□□□□ 0.82
UBQLN1Q9UMX0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.17■□□□□ 0.82
UBQLN1Q9UMX0 AC024243.1-201ENST00000609234 778 ntBASIC20.17■□□□□ 0.82
UBQLN1Q9UMX0 AC112497.1-201ENST00000624824 639 ntBASIC20.17■□□□□ 0.82
UBQLN1Q9UMX0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBQLN1Q9UMX0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBQLN1Q9UMX0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
UBQLN1Q9UMX0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBQLN1Q9UMX0 KRT8P7-201ENST00000533003 1432 ntBASIC20.17■□□□□ 0.82
UBQLN1Q9UMX0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
UBQLN1Q9UMX0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBQLN1Q9UMX0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBQLN1Q9UMX0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 AL049812.1-201ENST00000432563 2267 ntBASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 HEIH-201ENST00000623091 1652 ntBASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 STARP1-201ENST00000397973 869 ntBASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
UBQLN1Q9UMX0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 KRT18P38-201ENST00000449496 1282 ntBASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.15■□□□□ 0.82
UBQLN1Q9UMX0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms