Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.65■□□□□ 0.58
NCDNQ9UBB6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCDNQ9UBB6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.65■□□□□ 0.58
NCDNQ9UBB6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
NCDNQ9UBB6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCDNQ9UBB6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.65■□□□□ 0.58
NCDNQ9UBB6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCDNQ9UBB6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCDNQ9UBB6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NCDNQ9UBB6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
NCDNQ9UBB6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 NUS1P2-201ENST00000417358 873 ntBASIC18.64■□□□□ 0.57
NCDNQ9UBB6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 AF186996.4-201ENST00000467186 377 ntBASIC18.64■□□□□ 0.57
NCDNQ9UBB6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 RNA5SP419-201ENST00000515908 135 ntBASIC18.64■□□□□ 0.57
NCDNQ9UBB6 AF238378.1-201ENST00000526806 358 ntBASIC18.64■□□□□ 0.57
NCDNQ9UBB6 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NCDNQ9UBB6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 GPAT2P1-201ENST00000444924 1672 ntBASIC18.63■□□□□ 0.57
NCDNQ9UBB6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 MIR3917-201ENST00000580971 93 ntBASIC18.63■□□□□ 0.57
NCDNQ9UBB6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 AC022898.2-201ENST00000616822 1312 ntBASIC18.63■□□□□ 0.57
NCDNQ9UBB6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
NCDNQ9UBB6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NCDNQ9UBB6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.62■□□□□ 0.57
NCDNQ9UBB6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.62■□□□□ 0.57
NCDNQ9UBB6 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.62■□□□□ 0.57
NCDNQ9UBB6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCDNQ9UBB6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.62■□□□□ 0.57
NCDNQ9UBB6 VENTXP7-201ENST00000475503 772 ntBASIC18.62■□□□□ 0.57
NCDNQ9UBB6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.62■□□□□ 0.57
NCDNQ9UBB6 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.62■□□□□ 0.57
NCDNQ9UBB6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.62■□□□□ 0.57
NCDNQ9UBB6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.62■□□□□ 0.57
NCDNQ9UBB6 AC112497.1-201ENST00000624824 639 ntBASIC18.62■□□□□ 0.57
NCDNQ9UBB6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.62■□□□□ 0.57
NCDNQ9UBB6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.62■□□□□ 0.57
NCDNQ9UBB6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NCDNQ9UBB6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.62■□□□□ 0.57
NCDNQ9UBB6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NCDNQ9UBB6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCDNQ9UBB6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCDNQ9UBB6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NCDNQ9UBB6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NCDNQ9UBB6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NCDNQ9UBB6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.61■□□□□ 0.57
NCDNQ9UBB6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCDNQ9UBB6 MIR564-202ENST00000385049 94 ntBASIC18.61■□□□□ 0.57
NCDNQ9UBB6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
NCDNQ9UBB6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCDNQ9UBB6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.61■□□□□ 0.57
NCDNQ9UBB6 KRT18P67-201ENST00000432816 1264 ntBASIC18.61■□□□□ 0.57
NCDNQ9UBB6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.61■□□□□ 0.57
NCDNQ9UBB6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NCDNQ9UBB6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCDNQ9UBB6 MIR3180-5-201ENST00000583743 153 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms