Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CXXC1Q9P0U4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CXXC1Q9P0U4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 HMGN1P19-201ENST00000436976 333 ntBASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 AL049840.3-201ENST00000602669 611 ntBASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CXXC1Q9P0U4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 BX842568.4-201ENST00000421222 227 ntBASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 MINOS1P3-201ENST00000457048 203 ntBASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 VENTXP7-201ENST00000475503 772 ntBASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 TERC-201ENST00000602385 541 ntBASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.16■□□□□ 0.82
CXXC1Q9P0U4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CXXC1Q9P0U4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CXXC1Q9P0U4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CXXC1Q9P0U4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CXXC1Q9P0U4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.15■□□□□ 0.82
CXXC1Q9P0U4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.15■□□□□ 0.82
CXXC1Q9P0U4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.15■□□□□ 0.82
CXXC1Q9P0U4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.15■□□□□ 0.82
CXXC1Q9P0U4 AF186996.4-201ENST00000467186 377 ntBASIC20.15■□□□□ 0.82
CXXC1Q9P0U4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CXXC1Q9P0U4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.15■□□□□ 0.82
CXXC1Q9P0U4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CXXC1Q9P0U4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.15■□□□□ 0.82
CXXC1Q9P0U4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CXXC1Q9P0U4 AL512353.2-201ENST00000448759 1962 ntBASIC20.15■□□□□ 0.82
CXXC1Q9P0U4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CXXC1Q9P0U4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CXXC1Q9P0U4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CXXC1Q9P0U4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CXXC1Q9P0U4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
CXXC1Q9P0U4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
CXXC1Q9P0U4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CXXC1Q9P0U4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CXXC1Q9P0U4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CXXC1Q9P0U4 RPL13AP23-201ENST00000480739 586 ntBASIC20.14■□□□□ 0.81
CXXC1Q9P0U4 AC073648.2-201ENST00000510116 352 ntBASIC20.14■□□□□ 0.81
CXXC1Q9P0U4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.14■□□□□ 0.81
CXXC1Q9P0U4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.14■□□□□ 0.81
CXXC1Q9P0U4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.14■□□□□ 0.81
CXXC1Q9P0U4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.14■□□□□ 0.81
CXXC1Q9P0U4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.14■□□□□ 0.81
CXXC1Q9P0U4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CXXC1Q9P0U4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CXXC1Q9P0U4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CXXC1Q9P0U4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CXXC1Q9P0U4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CXXC1Q9P0U4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CXXC1Q9P0U4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CXXC1Q9P0U4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.13■□□□□ 0.81
CXXC1Q9P0U4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CXXC1Q9P0U4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CXXC1Q9P0U4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CXXC1Q9P0U4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CXXC1Q9P0U4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CXXC1Q9P0U4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms