Protein–RNA interactions for Protein: Q9NUL5

RYDEN, Repressor of yield of DENV protein, humanhuman

Known RBP Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYDENQ9NUL5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RYDENQ9NUL5 AC022960.2-201ENST00000616300 666 ntBASIC17.24■□□□□ 0.35
RYDENQ9NUL5 AL391262.2-201ENST00000622466 494 ntBASIC17.24■□□□□ 0.35
RYDENQ9NUL5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.24■□□□□ 0.35
RYDENQ9NUL5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RYDENQ9NUL5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RYDENQ9NUL5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.24■□□□□ 0.35
RYDENQ9NUL5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RYDENQ9NUL5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.24■□□□□ 0.35
RYDENQ9NUL5 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RYDENQ9NUL5 AC138932.1-201ENST00000534164 6830 ntBASIC17.24■□□□□ 0.35
RYDENQ9NUL5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RYDENQ9NUL5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RYDENQ9NUL5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RYDENQ9NUL5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RYDENQ9NUL5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 AC005332.7-201ENST00000614046 2005 ntBASIC17.23■□□□□ 0.35
RYDENQ9NUL5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 RCC2P3-201ENST00000418112 1537 ntBASIC17.23■□□□□ 0.35
RYDENQ9NUL5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 AK4P3-201ENST00000418260 669 ntBASIC17.23■□□□□ 0.35
RYDENQ9NUL5 TSPY5P-201ENST00000426936 936 ntBASIC17.23■□□□□ 0.35
RYDENQ9NUL5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 RN7SL850P-201ENST00000579959 291 ntBASIC17.23■□□□□ 0.35
RYDENQ9NUL5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RYDENQ9NUL5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 STARP1-201ENST00000397973 869 ntBASIC17.22■□□□□ 0.35
RYDENQ9NUL5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 YBX1P2-201ENST00000489612 999 ntBASIC17.22■□□□□ 0.35
RYDENQ9NUL5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 AL049597.2-201ENST00000565575 961 ntBASIC17.22■□□□□ 0.35
RYDENQ9NUL5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 HEIH-201ENST00000623091 1652 ntBASIC17.22■□□□□ 0.35
RYDENQ9NUL5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RYDENQ9NUL5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.21■□□□□ 0.35
RYDENQ9NUL5 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.21■□□□□ 0.35
RYDENQ9NUL5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RYDENQ9NUL5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RYDENQ9NUL5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RYDENQ9NUL5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RYDENQ9NUL5 AL158211.5-201ENST00000623583 2518 ntBASIC17.21■□□□□ 0.35
RYDENQ9NUL5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.21■□□□□ 0.35
RYDENQ9NUL5 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RYDENQ9NUL5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RYDENQ9NUL5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RYDENQ9NUL5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RYDENQ9NUL5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RYDENQ9NUL5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RYDENQ9NUL5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RYDENQ9NUL5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms