Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMCO4Q9NRQ5 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMCO4Q9NRQ5 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 pRNA.6-201ENST00000610482 90 ntBASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 pRNA.5-201ENST00000612139 90 ntBASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 pRNA.11-201ENST00000618423 90 ntBASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 pRNA.13-201ENST00000619112 90 ntBASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 DOC2GP-204ENST00000639052 2548 ntBASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMCO4Q9NRQ5 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC14.78□□□□□ -0.04
SMCO4Q9NRQ5 AC241377.3-202ENST00000626088 1088 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms