Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 AL732292.2-201ENST00000609649 430 ntBASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM7Q9NR12 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 FEM1AP3-201ENST00000403722 1741 ntBASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PDLIM7Q9NR12 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDLIM7Q9NR12 AC005332.7-201ENST00000614046 2005 ntBASIC21.05■□□□□ 0.96
PDLIM7Q9NR12 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.05■□□□□ 0.96
PDLIM7Q9NR12 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDLIM7Q9NR12 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDLIM7Q9NR12 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PDLIM7Q9NR12 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.05■□□□□ 0.96
PDLIM7Q9NR12 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
PDLIM7Q9NR12 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PDLIM7Q9NR12 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.05■□□□□ 0.96
PDLIM7Q9NR12 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDLIM7Q9NR12 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PDLIM7Q9NR12 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 TSPY19P-201ENST00000418461 509 ntBASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 TSPY18P-201ENST00000441642 509 ntBASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 AC079781.3-201ENST00000449110 356 ntBASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 AL160237.2-201ENST00000556165 472 ntBASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 IRX1P1-201ENST00000438849 1838 ntBASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.04■□□□□ 0.96
PDLIM7Q9NR12 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDLIM7Q9NR12 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms