Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZFYVE28Q9HCC9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 FAM220CP-201ENST00000395253 831 ntBASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 POM121L3P-201ENST00000419331 1163 ntBASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 AC106730.1-201ENST00000566722 1090 ntBASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 PMS2P7-201ENST00000506558 1336 ntBASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 RCC2P3-201ENST00000418112 1537 ntBASIC21.49■■□□□ 1.03
ZFYVE28Q9HCC9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 AC008556.1-201ENST00000610908 2040 ntBASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 POLD2P1-201ENST00000511220 997 ntBASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 AP005901.3-202ENST00000581653 237 ntBASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 AC024563.2-201ENST00000603282 481 ntBASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZFYVE28Q9HCC9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
ZFYVE28Q9HCC9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ZFYVE28Q9HCC9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZFYVE28Q9HCC9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.47■■□□□ 1.03
ZFYVE28Q9HCC9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZFYVE28Q9HCC9 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.47■■□□□ 1.03
ZFYVE28Q9HCC9 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.47■■□□□ 1.03
ZFYVE28Q9HCC9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.47■■□□□ 1.03
ZFYVE28Q9HCC9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
ZFYVE28Q9HCC9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.47■■□□□ 1.03
ZFYVE28Q9HCC9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZFYVE28Q9HCC9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
ZFYVE28Q9HCC9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZFYVE28Q9HCC9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ZFYVE28Q9HCC9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZFYVE28Q9HCC9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
ZFYVE28Q9HCC9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZFYVE28Q9HCC9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.46■■□□□ 1.03
ZFYVE28Q9HCC9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZFYVE28Q9HCC9 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.46■■□□□ 1.03
ZFYVE28Q9HCC9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.46■■□□□ 1.03
ZFYVE28Q9HCC9 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.46■■□□□ 1.03
ZFYVE28Q9HCC9 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.46■■□□□ 1.03
ZFYVE28Q9HCC9 AC011840.4-201ENST00000578471 627 ntBASIC21.46■■□□□ 1.03
ZFYVE28Q9HCC9 MIR3180-4-201ENST00000582223 153 ntBASIC21.46■■□□□ 1.03
ZFYVE28Q9HCC9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.46■■□□□ 1.03
ZFYVE28Q9HCC9 TERC-201ENST00000602385 541 ntBASIC21.46■■□□□ 1.03
ZFYVE28Q9HCC9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ZFYVE28Q9HCC9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.46■■□□□ 1.03
ZFYVE28Q9HCC9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.46■■□□□ 1.03
ZFYVE28Q9HCC9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZFYVE28Q9HCC9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZFYVE28Q9HCC9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZFYVE28Q9HCC9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
ZFYVE28Q9HCC9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.45■■□□□ 1.03
ZFYVE28Q9HCC9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZFYVE28Q9HCC9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZFYVE28Q9HCC9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.45■■□□□ 1.02
ZFYVE28Q9HCC9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZFYVE28Q9HCC9 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.45■■□□□ 1.02
ZFYVE28Q9HCC9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.45■■□□□ 1.02
ZFYVE28Q9HCC9 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.45■■□□□ 1.02
ZFYVE28Q9HCC9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.45■■□□□ 1.02
ZFYVE28Q9HCC9 AL591684.3-201ENST00000605187 298 ntBASIC21.45■■□□□ 1.02
ZFYVE28Q9HCC9 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC21.45■■□□□ 1.02
ZFYVE28Q9HCC9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZFYVE28Q9HCC9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZFYVE28Q9HCC9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms