Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 AC139713.2-201ENST00000641328 2723 ntBASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 KRT18P20-201ENST00000548986 1279 ntBASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 MIR4466-201ENST00000606121 54 ntBASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 AL589935.2-201ENST00000616471 1231 ntBASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 AL162741.1-201ENST00000565563 1558 ntBASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC5.08□□□□□ -1.6
LCE3DQ9BYE3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 RBM17P2-201ENST00000616397 1405 ntBASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC5.07□□□□□ -1.6
LCE3DQ9BYE3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms