Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AP003733.1-201ENST00000491725 852 ntBASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 CALM3-211ENST00000598871 561 ntTSL 4 BASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 AL121912.1-201ENST00000603683 238 ntBASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 AC006538.3-201ENST00000612495 578 ntBASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 VPS51-217ENST00000639871 243 ntTSL 5 BASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTFDC1Q9BY42 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.86■■□□□ 1.25
RTFDC1Q9BY42 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTFDC1Q9BY42 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTFDC1Q9BY42 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTFDC1Q9BY42 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC22.86■■□□□ 1.25
RTFDC1Q9BY42 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTFDC1Q9BY42 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RTFDC1Q9BY42 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
RTFDC1Q9BY42 MIR564-202ENST00000385049 94 ntBASIC22.86■■□□□ 1.25
RTFDC1Q9BY42 KRT16P4-201ENST00000453883 522 ntBASIC22.86■■□□□ 1.25
RTFDC1Q9BY42 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC22.86■■□□□ 1.25
RTFDC1Q9BY42 AL662844.1-201ENST00000546340 181 ntBASIC22.86■■□□□ 1.25
RTFDC1Q9BY42 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC22.86■■□□□ 1.25
RTFDC1Q9BY42 GPALPP1-207ENST00000611650 899 ntBASIC22.86■■□□□ 1.25
RTFDC1Q9BY42 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RTFDC1Q9BY42 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
RTFDC1Q9BY42 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.86■■□□□ 1.25
RTFDC1Q9BY42 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTFDC1Q9BY42 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RTFDC1Q9BY42 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RTFDC1Q9BY42 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTFDC1Q9BY42 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 IGHV3-47-201ENST00000425060 335 ntBASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 CALM1-205ENST00000553542 877 ntTSL 5 BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 TPM1-218ENST00000559281 851 ntTSL 5 BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 MIR3180-4-201ENST00000582223 153 ntBASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 AL353801.3-201ENST00000609898 542 ntBASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 TP73-202ENST00000354437 2140 ntTSL 5 BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
RTFDC1Q9BY42 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.84■■□□□ 1.25
RTFDC1Q9BY42 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RTFDC1Q9BY42 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RTFDC1Q9BY42 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RTFDC1Q9BY42 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RTFDC1Q9BY42 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC22.84■■□□□ 1.25
RTFDC1Q9BY42 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RTFDC1Q9BY42 MRPL3P1-201ENST00000400109 1033 ntBASIC22.84■■□□□ 1.25
RTFDC1Q9BY42 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC22.84■■□□□ 1.25
RTFDC1Q9BY42 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC22.84■■□□□ 1.25
RTFDC1Q9BY42 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC22.84■■□□□ 1.25
RTFDC1Q9BY42 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC22.84■■□□□ 1.25
RTFDC1Q9BY42 AC074051.2-201ENST00000565115 352 ntBASIC22.84■■□□□ 1.25
RTFDC1Q9BY42 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RTFDC1Q9BY42 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.84■■□□□ 1.25
RTFDC1Q9BY42 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RTFDC1Q9BY42 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RTFDC1Q9BY42 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RTFDC1Q9BY42 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RTFDC1Q9BY42 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RTFDC1Q9BY42 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
RTFDC1Q9BY42 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.83■■□□□ 1.25
RTFDC1Q9BY42 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RTFDC1Q9BY42 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22.83■■□□□ 1.25
RTFDC1Q9BY42 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.83■■□□□ 1.25
RTFDC1Q9BY42 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
RTFDC1Q9BY42 ENSA-205ENST00000361532 792 ntTSL 2 BASIC22.83■■□□□ 1.25
RTFDC1Q9BY42 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RTFDC1Q9BY42 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
RTFDC1Q9BY42 ELP6-205ENST00000439305 880 ntTSL 2 BASIC22.83■■□□□ 1.25
RTFDC1Q9BY42 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC22.83■■□□□ 1.25
RTFDC1Q9BY42 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC22.83■■□□□ 1.25
RTFDC1Q9BY42 RN7SL606P-201ENST00000472779 293 ntBASIC22.83■■□□□ 1.25
RTFDC1Q9BY42 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RTFDC1Q9BY42 IGHV3-41-201ENST00000613121 348 ntBASIC22.83■■□□□ 1.25
RTFDC1Q9BY42 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RTFDC1Q9BY42 TEX21P-204ENST00000641479 1693 ntBASIC22.83■■□□□ 1.24
RTFDC1Q9BY42 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms