Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 TEX21P-204ENST00000641479 1693 ntBASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.69■□□□□ 0.1
SSBP3Q9BWW4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 AK4P3-201ENST00000418260 669 ntBASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 DUX4L26-201ENST00000489078 1255 ntBASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 COX11P1-201ENST00000489116 835 ntBASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 AC006011.2-201ENST00000621313 1158 ntBASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 KRT8P45-201ENST00000414328 1447 ntBASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSBP3Q9BWW4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 AC098818.2-201ENST00000564925 2320 ntBASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 AC018445.3-201ENST00000624177 1945 ntBASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 AP000523.1-201ENST00000398242 1049 ntBASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 AC104076.2-201ENST00000448912 469 ntBASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 LINC01238-205ENST00000567549 1107 ntBASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 AL031432.5-201ENST00000641059 760 ntBASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms