Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSTQ99698 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
LYSTQ99698 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
LYSTQ99698 RPL13AP23-201ENST00000480739 586 ntBASIC13.02□□□□□ -0.33
LYSTQ99698 RNF126P1-202ENST00000569893 925 ntBASIC13.02□□□□□ -0.33
LYSTQ99698 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.02□□□□□ -0.33
LYSTQ99698 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LYSTQ99698 CLDN5-201ENST00000403084 2357 ntBASIC13.02□□□□□ -0.33
LYSTQ99698 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LYSTQ99698 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
LYSTQ99698 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.02□□□□□ -0.33
LYSTQ99698 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSTQ99698 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LYSTQ99698 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSTQ99698 HLA-J-202ENST00000469281 1241 ntBASIC13.02□□□□□ -0.33
LYSTQ99698 AC140113.2-201ENST00000604370 208 ntBASIC13.02□□□□□ -0.33
LYSTQ99698 AC024243.1-201ENST00000609234 778 ntBASIC13.02□□□□□ -0.33
LYSTQ99698 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSTQ99698 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSTQ99698 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LYSTQ99698 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSTQ99698 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LYSTQ99698 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LYSTQ99698 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSTQ99698 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSTQ99698 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.01□□□□□ -0.33
LYSTQ99698 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LYSTQ99698 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
LYSTQ99698 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC13.01□□□□□ -0.33
LYSTQ99698 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSTQ99698 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.01□□□□□ -0.33
LYSTQ99698 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
LYSTQ99698 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.01□□□□□ -0.33
LYSTQ99698 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSTQ99698 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSTQ99698 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LYSTQ99698 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.01□□□□□ -0.33
LYSTQ99698 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSTQ99698 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSTQ99698 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC13.01□□□□□ -0.33
LYSTQ99698 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LYSTQ99698 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSTQ99698 AL162377.1-201ENST00000618844 1793 ntBASIC13.01□□□□□ -0.33
LYSTQ99698 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC13.01□□□□□ -0.33
LYSTQ99698 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.01□□□□□ -0.33
LYSTQ99698 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSTQ99698 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LYSTQ99698 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LYSTQ99698 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LYSTQ99698 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSTQ99698 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LYSTQ99698 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
LYSTQ99698 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.01□□□□□ -0.33
LYSTQ99698 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.01□□□□□ -0.33
LYSTQ99698 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.01□□□□□ -0.33
LYSTQ99698 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LYSTQ99698 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.01□□□□□ -0.33
LYSTQ99698 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSTQ99698 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.01□□□□□ -0.33
LYSTQ99698 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.01□□□□□ -0.33
LYSTQ99698 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LYSTQ99698 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LYSTQ99698 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC13□□□□□ -0.33
LYSTQ99698 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC13□□□□□ -0.33
LYSTQ99698 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC13□□□□□ -0.33
LYSTQ99698 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LYSTQ99698 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC13□□□□□ -0.33
LYSTQ99698 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LYSTQ99698 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13□□□□□ -0.33
LYSTQ99698 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LYSTQ99698 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
LYSTQ99698 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
LYSTQ99698 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LYSTQ99698 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13□□□□□ -0.33
LYSTQ99698 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13□□□□□ -0.33
LYSTQ99698 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LYSTQ99698 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13□□□□□ -0.33
LYSTQ99698 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
LYSTQ99698 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC13□□□□□ -0.33
LYSTQ99698 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC13□□□□□ -0.33
LYSTQ99698 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13□□□□□ -0.33
LYSTQ99698 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LYSTQ99698 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC13□□□□□ -0.33
LYSTQ99698 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC13□□□□□ -0.33
LYSTQ99698 EMD-201ENST00000369835 966 ntTSL 3 BASIC13□□□□□ -0.33
LYSTQ99698 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LYSTQ99698 AC148477.8-201ENST00000624298 468 ntBASIC13□□□□□ -0.33
LYSTQ99698 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC13□□□□□ -0.33
LYSTQ99698 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13□□□□□ -0.33
LYSTQ99698 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13□□□□□ -0.33
LYSTQ99698 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC13□□□□□ -0.33
LYSTQ99698 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LYSTQ99698 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13□□□□□ -0.33
LYSTQ99698 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
LYSTQ99698 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LYSTQ99698 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LYSTQ99698 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13□□□□□ -0.33
LYSTQ99698 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
LYSTQ99698 AC018712.1-201ENST00000455767 687 ntBASIC13□□□□□ -0.33
LYSTQ99698 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms