Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GFI1Q99684 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
GFI1Q99684 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
GFI1Q99684 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.25■□□□□ 0.19
GFI1Q99684 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.25■□□□□ 0.19
GFI1Q99684 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GFI1Q99684 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GFI1Q99684 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
GFI1Q99684 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.24■□□□□ 0.19
GFI1Q99684 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.24■□□□□ 0.19
GFI1Q99684 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.24■□□□□ 0.19
GFI1Q99684 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.24■□□□□ 0.19
GFI1Q99684 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GFI1Q99684 AC092437.1-201ENST00000624794 1048 ntBASIC16.24■□□□□ 0.19
GFI1Q99684 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.24■□□□□ 0.19
GFI1Q99684 HLA-B-256ENST00000639848 1089 ntBASIC16.24■□□□□ 0.19
GFI1Q99684 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GFI1Q99684 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
GFI1Q99684 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
GFI1Q99684 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.24■□□□□ 0.19
GFI1Q99684 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
GFI1Q99684 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
GFI1Q99684 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
GFI1Q99684 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GFI1Q99684 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
GFI1Q99684 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
GFI1Q99684 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
GFI1Q99684 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GFI1Q99684 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GFI1Q99684 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.24■□□□□ 0.19
GFI1Q99684 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.24■□□□□ 0.19
GFI1Q99684 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
GFI1Q99684 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GFI1Q99684 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
GFI1Q99684 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.23■□□□□ 0.19
GFI1Q99684 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GFI1Q99684 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
GFI1Q99684 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GFI1Q99684 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.23■□□□□ 0.19
GFI1Q99684 AC012313.1-201ENST00000593393 3059 ntBASIC16.23■□□□□ 0.19
GFI1Q99684 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.23■□□□□ 0.19
GFI1Q99684 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
GFI1Q99684 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
GFI1Q99684 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.23■□□□□ 0.19
GFI1Q99684 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.23■□□□□ 0.19
GFI1Q99684 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GFI1Q99684 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GFI1Q99684 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GFI1Q99684 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GFI1Q99684 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GFI1Q99684 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GFI1Q99684 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.23■□□□□ 0.19
GFI1Q99684 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GFI1Q99684 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
GFI1Q99684 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.23■□□□□ 0.19
GFI1Q99684 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.23■□□□□ 0.19
GFI1Q99684 PNMA6B-201ENST00000538162 1200 ntBASIC16.23■□□□□ 0.19
GFI1Q99684 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.23■□□□□ 0.19
GFI1Q99684 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
GFI1Q99684 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.23■□□□□ 0.19
GFI1Q99684 MYC-209ENST00000641252 345 ntBASIC16.23■□□□□ 0.19
GFI1Q99684 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
GFI1Q99684 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
GFI1Q99684 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.23■□□□□ 0.19
GFI1Q99684 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
GFI1Q99684 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.23■□□□□ 0.19
GFI1Q99684 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GFI1Q99684 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GFI1Q99684 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.23■□□□□ 0.19
GFI1Q99684 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
GFI1Q99684 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GFI1Q99684 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.22■□□□□ 0.19
GFI1Q99684 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
GFI1Q99684 AC138028.4-201ENST00000564984 1845 ntBASIC16.22■□□□□ 0.19
GFI1Q99684 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.22■□□□□ 0.19
GFI1Q99684 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.22■□□□□ 0.19
GFI1Q99684 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.22■□□□□ 0.19
GFI1Q99684 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.22■□□□□ 0.19
GFI1Q99684 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GFI1Q99684 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
GFI1Q99684 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.22■□□□□ 0.19
GFI1Q99684 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GFI1Q99684 CROCCP5-201ENST00000436658 830 ntBASIC16.22■□□□□ 0.19
GFI1Q99684 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.22■□□□□ 0.19
GFI1Q99684 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.22■□□□□ 0.19
GFI1Q99684 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
GFI1Q99684 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
GFI1Q99684 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.22■□□□□ 0.19
GFI1Q99684 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.22■□□□□ 0.19
GFI1Q99684 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
GFI1Q99684 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GFI1Q99684 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
GFI1Q99684 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.22■□□□□ 0.19
GFI1Q99684 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
GFI1Q99684 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GFI1Q99684 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GFI1Q99684 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
GFI1Q99684 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
GFI1Q99684 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GFI1Q99684 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms