Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PKP4Q99569 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PKP4Q99569 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PKP4Q99569 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
PKP4Q99569 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PKP4Q99569 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.31■□□□□ 0.52
PKP4Q99569 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PKP4Q99569 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PKP4Q99569 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PKP4Q99569 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.31■□□□□ 0.52
PKP4Q99569 BX088651.1-201ENST00000540551 451 ntBASIC18.31■□□□□ 0.52
PKP4Q99569 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.31■□□□□ 0.52
PKP4Q99569 AL023803.3-201ENST00000615559 522 ntBASIC18.31■□□□□ 0.52
PKP4Q99569 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PKP4Q99569 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.31■□□□□ 0.52
PKP4Q99569 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PKP4Q99569 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PKP4Q99569 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PKP4Q99569 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
PKP4Q99569 HEIH-201ENST00000623091 1652 ntBASIC18.31■□□□□ 0.52
PKP4Q99569 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PKP4Q99569 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PKP4Q99569 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PKP4Q99569 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.3■□□□□ 0.52
PKP4Q99569 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PKP4Q99569 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PKP4Q99569 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.3■□□□□ 0.52
PKP4Q99569 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PKP4Q99569 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.3■□□□□ 0.52
PKP4Q99569 RCC2P3-201ENST00000418112 1537 ntBASIC18.3■□□□□ 0.52
PKP4Q99569 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PKP4Q99569 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.3■□□□□ 0.52
PKP4Q99569 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.3■□□□□ 0.52
PKP4Q99569 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PKP4Q99569 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
PKP4Q99569 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
PKP4Q99569 SLC25A1P2-201ENST00000430693 912 ntBASIC18.3■□□□□ 0.52
PKP4Q99569 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PKP4Q99569 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.3■□□□□ 0.52
PKP4Q99569 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.3■□□□□ 0.52
PKP4Q99569 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PKP4Q99569 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.3■□□□□ 0.52
PKP4Q99569 AC093525.10-201ENST00000625130 1569 ntBASIC18.3■□□□□ 0.52
PKP4Q99569 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.3■□□□□ 0.52
PKP4Q99569 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PKP4Q99569 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.29■□□□□ 0.52
PKP4Q99569 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PKP4Q99569 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PKP4Q99569 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PKP4Q99569 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PKP4Q99569 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PKP4Q99569 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.29■□□□□ 0.52
PKP4Q99569 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PKP4Q99569 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.29■□□□□ 0.52
PKP4Q99569 C2orf69P3-201ENST00000565542 1120 ntBASIC18.29■□□□□ 0.52
PKP4Q99569 AC010947.1-201ENST00000623454 693 ntBASIC18.29■□□□□ 0.52
PKP4Q99569 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PKP4Q99569 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
PKP4Q99569 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PKP4Q99569 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PKP4Q99569 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
PKP4Q99569 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PKP4Q99569 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PKP4Q99569 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PKP4Q99569 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PKP4Q99569 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PKP4Q99569 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.28■□□□□ 0.52
PKP4Q99569 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.28■□□□□ 0.52
PKP4Q99569 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PKP4Q99569 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PKP4Q99569 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.28■□□□□ 0.52
PKP4Q99569 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PKP4Q99569 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PKP4Q99569 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PKP4Q99569 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.28■□□□□ 0.52
PKP4Q99569 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.28■□□□□ 0.52
PKP4Q99569 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PKP4Q99569 AL023284.2-201ENST00000405850 579 ntBASIC18.28■□□□□ 0.52
PKP4Q99569 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
PKP4Q99569 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.28■□□□□ 0.52
PKP4Q99569 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.28■□□□□ 0.52
PKP4Q99569 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.28■□□□□ 0.52
PKP4Q99569 AL353719.1-201ENST00000566847 864 ntBASIC18.28■□□□□ 0.52
PKP4Q99569 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.28■□□□□ 0.52
PKP4Q99569 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PKP4Q99569 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PKP4Q99569 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.28■□□□□ 0.52
PKP4Q99569 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.28■□□□□ 0.52
PKP4Q99569 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
PKP4Q99569 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.28■□□□□ 0.52
PKP4Q99569 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PKP4Q99569 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PKP4Q99569 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PKP4Q99569 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PKP4Q99569 GPAT2P1-201ENST00000444924 1672 ntBASIC18.28■□□□□ 0.52
PKP4Q99569 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.28■□□□□ 0.52
PKP4Q99569 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PKP4Q99569 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PKP4Q99569 AL031598.1-201ENST00000561511 1773 ntBASIC18.27■□□□□ 0.52
PKP4Q99569 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms