Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 MIR939-201ENST00000401314 82 ntBASIC17.74■□□□□ 0.43
NR1H4Q96RI1 AC091305.1-201ENST00000479476 895 ntBASIC17.74■□□□□ 0.43
NR1H4Q96RI1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 AL031963.3-201ENST00000606441 850 ntBASIC17.74■□□□□ 0.43
NR1H4Q96RI1 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 ZNF815P-204ENST00000434898 1737 ntBASIC17.73■□□□□ 0.43
NR1H4Q96RI1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 AC007322.3-201ENST00000426526 701 ntBASIC17.73■□□□□ 0.43
NR1H4Q96RI1 AL136967.2-201ENST00000623968 743 ntBASIC17.73■□□□□ 0.43
NR1H4Q96RI1 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.73■□□□□ 0.43
NR1H4Q96RI1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.72■□□□□ 0.43
NR1H4Q96RI1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 PGM5P4-201ENST00000421970 445 ntBASIC17.72■□□□□ 0.43
NR1H4Q96RI1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NR1H4Q96RI1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 AC022211.2-201ENST00000585075 2527 ntBASIC17.71■□□□□ 0.43
NR1H4Q96RI1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NR1H4Q96RI1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms