Protein–RNA interactions for Protein: Q96QV1

HHIP, Hedgehog-interacting protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHIPQ96QV1 SDHAP1-207ENST00000440850 2000 ntBASIC19.04■□□□□ 0.64
HHIPQ96QV1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.04■□□□□ 0.64
HHIPQ96QV1 AP002383.4-201ENST00000442518 975 ntBASIC19.04■□□□□ 0.64
HHIPQ96QV1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HHIPQ96QV1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.04■□□□□ 0.64
HHIPQ96QV1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.04■□□□□ 0.64
HHIPQ96QV1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.04■□□□□ 0.64
HHIPQ96QV1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
HHIPQ96QV1 AP002414.4-201ENST00000589764 1148 ntBASIC19.04■□□□□ 0.64
HHIPQ96QV1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HHIPQ96QV1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HHIPQ96QV1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HHIPQ96QV1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HHIPQ96QV1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HHIPQ96QV1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HHIPQ96QV1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HHIPQ96QV1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HHIPQ96QV1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HHIPQ96QV1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.03■□□□□ 0.64
HHIPQ96QV1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HHIPQ96QV1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.03■□□□□ 0.64
HHIPQ96QV1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HHIPQ96QV1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HHIPQ96QV1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.03■□□□□ 0.64
HHIPQ96QV1 UNC93B7-201ENST00000509439 705 ntBASIC19.03■□□□□ 0.64
HHIPQ96QV1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HHIPQ96QV1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HHIPQ96QV1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.03■□□□□ 0.64
HHIPQ96QV1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.03■□□□□ 0.64
HHIPQ96QV1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HHIPQ96QV1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
HHIPQ96QV1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.03■□□□□ 0.64
HHIPQ96QV1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HHIPQ96QV1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.03■□□□□ 0.64
HHIPQ96QV1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.03■□□□□ 0.64
HHIPQ96QV1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HHIPQ96QV1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HHIPQ96QV1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.02■□□□□ 0.64
HHIPQ96QV1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.02■□□□□ 0.64
HHIPQ96QV1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.02■□□□□ 0.64
HHIPQ96QV1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.02■□□□□ 0.64
HHIPQ96QV1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HHIPQ96QV1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HHIPQ96QV1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HHIPQ96QV1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HHIPQ96QV1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HHIPQ96QV1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.02■□□□□ 0.64
HHIPQ96QV1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.02■□□□□ 0.64
HHIPQ96QV1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.02■□□□□ 0.64
HHIPQ96QV1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
HHIPQ96QV1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
HHIPQ96QV1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HHIPQ96QV1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HHIPQ96QV1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.02■□□□□ 0.63
HHIPQ96QV1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HHIPQ96QV1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.01■□□□□ 0.63
HHIPQ96QV1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HHIPQ96QV1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.01■□□□□ 0.63
HHIPQ96QV1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HHIPQ96QV1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
HHIPQ96QV1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.01■□□□□ 0.63
HHIPQ96QV1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HHIPQ96QV1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.01■□□□□ 0.63
HHIPQ96QV1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HHIPQ96QV1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HHIPQ96QV1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HHIPQ96QV1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HHIPQ96QV1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HHIPQ96QV1 MCCD1P1-208ENST00000445732 328 ntBASIC19.01■□□□□ 0.63
HHIPQ96QV1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.01■□□□□ 0.63
HHIPQ96QV1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HHIPQ96QV1 AC079602.3-201ENST00000623931 403 ntBASIC19.01■□□□□ 0.63
HHIPQ96QV1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.01■□□□□ 0.63
HHIPQ96QV1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.01■□□□□ 0.63
HHIPQ96QV1 AL162741.1-201ENST00000565563 1558 ntBASIC19.01■□□□□ 0.63
HHIPQ96QV1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HHIPQ96QV1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HHIPQ96QV1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HHIPQ96QV1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19■□□□□ 0.63
HHIPQ96QV1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19■□□□□ 0.63
HHIPQ96QV1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HHIPQ96QV1 AC116562.4-201ENST00000641316 2276 ntBASIC19■□□□□ 0.63
HHIPQ96QV1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19■□□□□ 0.63
HHIPQ96QV1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19■□□□□ 0.63
HHIPQ96QV1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HHIPQ96QV1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HHIPQ96QV1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19■□□□□ 0.63
HHIPQ96QV1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HHIPQ96QV1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HHIPQ96QV1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HHIPQ96QV1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HHIPQ96QV1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19■□□□□ 0.63
HHIPQ96QV1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19■□□□□ 0.63
HHIPQ96QV1 FDX1P1-201ENST00000449115 551 ntBASIC19■□□□□ 0.63
HHIPQ96QV1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19■□□□□ 0.63
HHIPQ96QV1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
HHIPQ96QV1 MIR3180-5-201ENST00000583743 153 ntBASIC19■□□□□ 0.63
HHIPQ96QV1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19■□□□□ 0.63
HHIPQ96QV1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19■□□□□ 0.63
HHIPQ96QV1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms