Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SPG11Q96JI7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.94■□□□□ 0.14
SPG11Q96JI7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
SPG11Q96JI7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SPG11Q96JI7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.94■□□□□ 0.14
SPG11Q96JI7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SPG11Q96JI7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.94■□□□□ 0.14
SPG11Q96JI7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.94■□□□□ 0.14
SPG11Q96JI7 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.94■□□□□ 0.14
SPG11Q96JI7 AC090616.6-201ENST00000582640 721 ntBASIC15.94■□□□□ 0.14
SPG11Q96JI7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.94■□□□□ 0.14
SPG11Q96JI7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SPG11Q96JI7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
SPG11Q96JI7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.93■□□□□ 0.14
SPG11Q96JI7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.93■□□□□ 0.14
SPG11Q96JI7 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.93■□□□□ 0.14
SPG11Q96JI7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SPG11Q96JI7 AP005901.3-202ENST00000581653 237 ntBASIC15.93■□□□□ 0.14
SPG11Q96JI7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SPG11Q96JI7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.93■□□□□ 0.14
SPG11Q96JI7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.93■□□□□ 0.14
SPG11Q96JI7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.93■□□□□ 0.14
SPG11Q96JI7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.93■□□□□ 0.14
SPG11Q96JI7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.93■□□□□ 0.14
SPG11Q96JI7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.93■□□□□ 0.14
SPG11Q96JI7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.93■□□□□ 0.14
SPG11Q96JI7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.93■□□□□ 0.14
SPG11Q96JI7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.93■□□□□ 0.14
SPG11Q96JI7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SPG11Q96JI7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
SPG11Q96JI7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPG11Q96JI7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.92■□□□□ 0.14
SPG11Q96JI7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPG11Q96JI7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
SPG11Q96JI7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SPG11Q96JI7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.92■□□□□ 0.14
SPG11Q96JI7 AC140113.2-201ENST00000604370 208 ntBASIC15.92■□□□□ 0.14
SPG11Q96JI7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
SPG11Q96JI7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SPG11Q96JI7 HTR7P1-202ENST00000624664 4411 ntBASIC15.92■□□□□ 0.14
SPG11Q96JI7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPG11Q96JI7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPG11Q96JI7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SPG11Q96JI7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPG11Q96JI7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.92■□□□□ 0.14
SPG11Q96JI7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPG11Q96JI7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPG11Q96JI7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPG11Q96JI7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SPG11Q96JI7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.92■□□□□ 0.14
SPG11Q96JI7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SPG11Q96JI7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.91■□□□□ 0.14
SPG11Q96JI7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SPG11Q96JI7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPG11Q96JI7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPG11Q96JI7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPG11Q96JI7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPG11Q96JI7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.91■□□□□ 0.14
SPG11Q96JI7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPG11Q96JI7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPG11Q96JI7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SPG11Q96JI7 AF186996.4-201ENST00000467186 377 ntBASIC15.91■□□□□ 0.14
SPG11Q96JI7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPG11Q96JI7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
SPG11Q96JI7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms