Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 PNMA6B-201ENST00000538162 1200 ntBASIC17.91■□□□□ 0.46
LRRC58Q96CX6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 FZD10-202ENST00000539839 3282 ntBASIC17.91■□□□□ 0.46
LRRC58Q96CX6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRC58Q96CX6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 RCC2P6-201ENST00000526625 1557 ntBASIC17.9■□□□□ 0.46
LRRC58Q96CX6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC58Q96CX6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LRRC58Q96CX6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.89■□□□□ 0.46
LRRC58Q96CX6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LRRC58Q96CX6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LRRC58Q96CX6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 CROCCP5-201ENST00000436658 830 ntBASIC17.89■□□□□ 0.45
LRRC58Q96CX6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.89■□□□□ 0.45
LRRC58Q96CX6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 AC083906.2-201ENST00000511578 360 ntBASIC17.89■□□□□ 0.45
LRRC58Q96CX6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 AC060766.5-201ENST00000590539 871 ntBASIC17.89■□□□□ 0.45
LRRC58Q96CX6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.89■□□□□ 0.45
LRRC58Q96CX6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 ESPNP-201ENST00000270691 2015 ntBASIC17.89■□□□□ 0.45
LRRC58Q96CX6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.89■□□□□ 0.45
LRRC58Q96CX6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC58Q96CX6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms