Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 AC092368.3-202ENST00000574180 1591 ntBASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXRED1Q96CU9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 PCDHB18P-201ENST00000524813 2368 ntBASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 FZD10-202ENST00000539839 3282 ntBASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXRED1Q96CU9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXRED1Q96CU9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXRED1Q96CU9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXRED1Q96CU9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FOXRED1Q96CU9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXRED1Q96CU9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
FOXRED1Q96CU9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXRED1Q96CU9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXRED1Q96CU9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.35■□□□□ 0.21
FOXRED1Q96CU9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.35■□□□□ 0.21
FOXRED1Q96CU9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.35■□□□□ 0.21
FOXRED1Q96CU9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.35■□□□□ 0.21
FOXRED1Q96CU9 AC120498.8-201ENST00000614275 531 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms