Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TIFAQ96CG3 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.1■□□□□ 0.81
TIFAQ96CG3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TIFAQ96CG3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TIFAQ96CG3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TIFAQ96CG3 AC139887.3-201ENST00000568585 713 ntBASIC20.1■□□□□ 0.81
TIFAQ96CG3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.1■□□□□ 0.81
TIFAQ96CG3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TIFAQ96CG3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TIFAQ96CG3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TIFAQ96CG3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.1■□□□□ 0.81
TIFAQ96CG3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TIFAQ96CG3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
TIFAQ96CG3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TIFAQ96CG3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.09■□□□□ 0.81
TIFAQ96CG3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TIFAQ96CG3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.09■□□□□ 0.81
TIFAQ96CG3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TIFAQ96CG3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TIFAQ96CG3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TIFAQ96CG3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.09■□□□□ 0.81
TIFAQ96CG3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.09■□□□□ 0.81
TIFAQ96CG3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TIFAQ96CG3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.09■□□□□ 0.81
TIFAQ96CG3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.09■□□□□ 0.81
TIFAQ96CG3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.09■□□□□ 0.81
TIFAQ96CG3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.09■□□□□ 0.81
TIFAQ96CG3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
TIFAQ96CG3 AP005901.3-202ENST00000581653 237 ntBASIC20.09■□□□□ 0.81
TIFAQ96CG3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.09■□□□□ 0.81
TIFAQ96CG3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TIFAQ96CG3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.09■□□□□ 0.81
TIFAQ96CG3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.09■□□□□ 0.81
TIFAQ96CG3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.09■□□□□ 0.81
TIFAQ96CG3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TIFAQ96CG3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.09■□□□□ 0.81
TIFAQ96CG3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.09■□□□□ 0.81
TIFAQ96CG3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TIFAQ96CG3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TIFAQ96CG3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TIFAQ96CG3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TIFAQ96CG3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TIFAQ96CG3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TIFAQ96CG3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.08■□□□□ 0.81
TIFAQ96CG3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TIFAQ96CG3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TIFAQ96CG3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TIFAQ96CG3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TIFAQ96CG3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.08■□□□□ 0.81
TIFAQ96CG3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TIFAQ96CG3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TIFAQ96CG3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TIFAQ96CG3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TIFAQ96CG3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
TIFAQ96CG3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TIFAQ96CG3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.08■□□□□ 0.81
TIFAQ96CG3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.08■□□□□ 0.81
TIFAQ96CG3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.08■□□□□ 0.81
TIFAQ96CG3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.08■□□□□ 0.81
TIFAQ96CG3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TIFAQ96CG3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
TIFAQ96CG3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TIFAQ96CG3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TIFAQ96CG3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TIFAQ96CG3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TIFAQ96CG3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.07■□□□□ 0.8
TIFAQ96CG3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.07■□□□□ 0.8
TIFAQ96CG3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.07■□□□□ 0.8
TIFAQ96CG3 POM121L3P-201ENST00000419331 1163 ntBASIC20.07■□□□□ 0.8
TIFAQ96CG3 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.07■□□□□ 0.8
TIFAQ96CG3 AC098831.1-202ENST00000438821 336 ntBASIC20.07■□□□□ 0.8
TIFAQ96CG3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.07■□□□□ 0.8
TIFAQ96CG3 RN7SL606P-201ENST00000472779 293 ntBASIC20.07■□□□□ 0.8
TIFAQ96CG3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.07■□□□□ 0.8
TIFAQ96CG3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.07■□□□□ 0.8
TIFAQ96CG3 AL049840.3-201ENST00000602669 611 ntBASIC20.07■□□□□ 0.8
TIFAQ96CG3 AL591684.3-201ENST00000605187 298 ntBASIC20.07■□□□□ 0.8
TIFAQ96CG3 AC010240.3-201ENST00000607688 395 ntBASIC20.07■□□□□ 0.8
TIFAQ96CG3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.07■□□□□ 0.8
TIFAQ96CG3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.07■□□□□ 0.8
TIFAQ96CG3 MIR7706-201ENST00000613747 67 ntBASIC20.07■□□□□ 0.8
TIFAQ96CG3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TIFAQ96CG3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.07■□□□□ 0.8
TIFAQ96CG3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TIFAQ96CG3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TIFAQ96CG3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
TIFAQ96CG3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TIFAQ96CG3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TIFAQ96CG3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.07■□□□□ 0.8
TIFAQ96CG3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TIFAQ96CG3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TIFAQ96CG3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TIFAQ96CG3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TIFAQ96CG3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TIFAQ96CG3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TIFAQ96CG3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TIFAQ96CG3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.06■□□□□ 0.8
TIFAQ96CG3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TIFAQ96CG3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TIFAQ96CG3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms