Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 AC073508.3-201ENST00000619697 1419 ntBASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 BX323043.1-201ENST00000641006 1765 ntBASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
SH3KBP1Q96B97 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 AL590326.2-201ENST00000625139 305 ntBASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3KBP1Q96B97 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 AL032819.2-201ENST00000624543 2162 ntBASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 KRT18P57-201ENST00000443599 1254 ntBASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 FAM87A-204ENST00000613235 858 ntBASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.61■□□□□ 0.57
SH3KBP1Q96B97 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 AL353719.1-201ENST00000566847 864 ntBASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 AL023803.3-201ENST00000615559 522 ntBASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms