Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SSH3Q8TE77 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
SSH3Q8TE77 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SSH3Q8TE77 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SSH3Q8TE77 AL137013.1-201ENST00000432946 1228 ntBASIC23.22■■□□□ 1.31
SSH3Q8TE77 ELP6-205ENST00000439305 880 ntTSL 2 BASIC23.22■■□□□ 1.31
SSH3Q8TE77 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
SSH3Q8TE77 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC23.22■■□□□ 1.31
SSH3Q8TE77 LGALS8-AS1-201ENST00000487567 1457 ntBASIC23.22■■□□□ 1.31
SSH3Q8TE77 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SSH3Q8TE77 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SSH3Q8TE77 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SSH3Q8TE77 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SSH3Q8TE77 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC23.22■■□□□ 1.31
SSH3Q8TE77 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SSH3Q8TE77 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SSH3Q8TE77 AC009947.2-201ENST00000444014 672 ntBASIC23.21■■□□□ 1.31
SSH3Q8TE77 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC23.21■■□□□ 1.31
SSH3Q8TE77 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SSH3Q8TE77 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SSH3Q8TE77 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SSH3Q8TE77 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SSH3Q8TE77 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SSH3Q8TE77 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC23.21■■□□□ 1.31
SSH3Q8TE77 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SSH3Q8TE77 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SSH3Q8TE77 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
SSH3Q8TE77 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC23.2■■□□□ 1.3
SSH3Q8TE77 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC23.2■■□□□ 1.3
SSH3Q8TE77 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SSH3Q8TE77 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SSH3Q8TE77 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SSH3Q8TE77 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SSH3Q8TE77 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
SSH3Q8TE77 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SSH3Q8TE77 HOXB1-202ENST00000577092 1414 ntBASIC23.2■■□□□ 1.3
SSH3Q8TE77 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SSH3Q8TE77 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23.2■■□□□ 1.3
SSH3Q8TE77 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC23.2■■□□□ 1.3
SSH3Q8TE77 TK2-213ENST00000563369 882 ntTSL 5 BASIC23.2■■□□□ 1.3
SSH3Q8TE77 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SSH3Q8TE77 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SSH3Q8TE77 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SSH3Q8TE77 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC23.2■■□□□ 1.3
SSH3Q8TE77 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SSH3Q8TE77 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SSH3Q8TE77 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SSH3Q8TE77 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SSH3Q8TE77 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SSH3Q8TE77 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC23.19■■□□□ 1.3
SSH3Q8TE77 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC23.19■■□□□ 1.3
SSH3Q8TE77 CD70-202ENST00000423145 881 ntTSL 2 BASIC23.19■■□□□ 1.3
SSH3Q8TE77 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SSH3Q8TE77 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC23.19■■□□□ 1.3
SSH3Q8TE77 CFL2-205ENST00000555765 632 ntTSL 2 BASIC23.19■■□□□ 1.3
SSH3Q8TE77 NEK4P2-201ENST00000580004 1012 ntBASIC23.19■■□□□ 1.3
SSH3Q8TE77 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SSH3Q8TE77 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
SSH3Q8TE77 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
SSH3Q8TE77 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SSH3Q8TE77 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
SSH3Q8TE77 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SSH3Q8TE77 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC23.19■■□□□ 1.3
SSH3Q8TE77 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SSH3Q8TE77 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SSH3Q8TE77 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC23.19■■□□□ 1.3
SSH3Q8TE77 AC034236.2-201ENST00000606662 1610 ntBASIC23.19■■□□□ 1.3
SSH3Q8TE77 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SSH3Q8TE77 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC23.18■■□□□ 1.3
SSH3Q8TE77 AL499627.1-201ENST00000569373 2188 ntBASIC23.18■■□□□ 1.3
SSH3Q8TE77 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SSH3Q8TE77 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SSH3Q8TE77 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC23.18■■□□□ 1.3
SSH3Q8TE77 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SSH3Q8TE77 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SSH3Q8TE77 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SSH3Q8TE77 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SSH3Q8TE77 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SSH3Q8TE77 Telomerase-vert.1-201ENST00000363312 438 ntBASIC23.18■■□□□ 1.3
SSH3Q8TE77 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.18■■□□□ 1.3
SSH3Q8TE77 KRT18P57-201ENST00000443599 1254 ntBASIC23.18■■□□□ 1.3
SSH3Q8TE77 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SSH3Q8TE77 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC23.18■■□□□ 1.3
SSH3Q8TE77 RBM42-202ENST00000586618 771 ntTSL 3 BASIC23.18■■□□□ 1.3
SSH3Q8TE77 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SSH3Q8TE77 AC092865.7-201ENST00000641832 219 ntBASIC23.18■■□□□ 1.3
SSH3Q8TE77 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC23.18■■□□□ 1.3
SSH3Q8TE77 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC23.18■■□□□ 1.3
SSH3Q8TE77 AC004408.2-201ENST00000623613 2777 ntBASIC23.18■■□□□ 1.3
SSH3Q8TE77 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SSH3Q8TE77 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC23.18■■□□□ 1.3
SSH3Q8TE77 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SSH3Q8TE77 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SSH3Q8TE77 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SSH3Q8TE77 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SSH3Q8TE77 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SSH3Q8TE77 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
SSH3Q8TE77 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SSH3Q8TE77 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SSH3Q8TE77 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms