Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBA3Q8TBC4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.92■□□□□ 0.78
UBA3Q8TBC4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.92■□□□□ 0.78
UBA3Q8TBC4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBA3Q8TBC4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBA3Q8TBC4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBA3Q8TBC4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.92■□□□□ 0.78
UBA3Q8TBC4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBA3Q8TBC4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBA3Q8TBC4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.92■□□□□ 0.78
UBA3Q8TBC4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.92■□□□□ 0.78
UBA3Q8TBC4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBA3Q8TBC4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBA3Q8TBC4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBA3Q8TBC4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBA3Q8TBC4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
UBA3Q8TBC4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.92■□□□□ 0.78
UBA3Q8TBC4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 ECEL1P3-201ENST00000427961 737 ntBASIC19.91■□□□□ 0.78
UBA3Q8TBC4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 AC128688.1-201ENST00000487626 519 ntBASIC19.91■□□□□ 0.78
UBA3Q8TBC4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 AC145285.6-201ENST00000604632 637 ntBASIC19.91■□□□□ 0.78
UBA3Q8TBC4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 AC083906.6-201ENST00000641366 219 ntBASIC19.91■□□□□ 0.78
UBA3Q8TBC4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 AC004408.2-201ENST00000623613 2777 ntBASIC19.91■□□□□ 0.78
UBA3Q8TBC4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBA3Q8TBC4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.9■□□□□ 0.78
UBA3Q8TBC4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.9■□□□□ 0.78
UBA3Q8TBC4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.9■□□□□ 0.78
UBA3Q8TBC4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBA3Q8TBC4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBA3Q8TBC4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.9■□□□□ 0.78
UBA3Q8TBC4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.9■□□□□ 0.78
UBA3Q8TBC4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBA3Q8TBC4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.9■□□□□ 0.78
UBA3Q8TBC4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBA3Q8TBC4 AC012306.2-201ENST00000609350 630 ntBASIC19.9■□□□□ 0.78
UBA3Q8TBC4 FAM87A-204ENST00000613235 858 ntBASIC19.9■□□□□ 0.78
UBA3Q8TBC4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
UBA3Q8TBC4 AC068587.9-201ENST00000641814 219 ntBASIC19.9■□□□□ 0.78
UBA3Q8TBC4 KRT18P22-201ENST00000402024 1347 ntBASIC19.9■□□□□ 0.78
UBA3Q8TBC4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
UBA3Q8TBC4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBA3Q8TBC4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
UBA3Q8TBC4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.9■□□□□ 0.78
UBA3Q8TBC4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBA3Q8TBC4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBA3Q8TBC4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBA3Q8TBC4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
UBA3Q8TBC4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
UBA3Q8TBC4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBA3Q8TBC4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBA3Q8TBC4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.89■□□□□ 0.77
UBA3Q8TBC4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
UBA3Q8TBC4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.89■□□□□ 0.77
UBA3Q8TBC4 CROCCP3-202ENST00000420820 1947 ntBASIC19.89■□□□□ 0.77
UBA3Q8TBC4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.89■□□□□ 0.77
UBA3Q8TBC4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.89■□□□□ 0.77
UBA3Q8TBC4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.89■□□□□ 0.77
UBA3Q8TBC4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
UBA3Q8TBC4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBA3Q8TBC4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
UBA3Q8TBC4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.89■□□□□ 0.77
UBA3Q8TBC4 AC008556.1-201ENST00000610908 2040 ntBASIC19.89■□□□□ 0.77
UBA3Q8TBC4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBA3Q8TBC4 HEIH-201ENST00000623091 1652 ntBASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms