Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PAF1Q8N7H5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.34■□□□□ 0.69
PAF1Q8N7H5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PAF1Q8N7H5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PAF1Q8N7H5 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PAF1Q8N7H5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.34■□□□□ 0.69
PAF1Q8N7H5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.34■□□□□ 0.69
PAF1Q8N7H5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PAF1Q8N7H5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PAF1Q8N7H5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.33■□□□□ 0.69
PAF1Q8N7H5 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
PAF1Q8N7H5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.33■□□□□ 0.69
PAF1Q8N7H5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PAF1Q8N7H5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.33■□□□□ 0.68
PAF1Q8N7H5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.33■□□□□ 0.68
PAF1Q8N7H5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.33■□□□□ 0.68
PAF1Q8N7H5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.33■□□□□ 0.68
PAF1Q8N7H5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.33■□□□□ 0.68
PAF1Q8N7H5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.33■□□□□ 0.68
PAF1Q8N7H5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
PAF1Q8N7H5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.33■□□□□ 0.68
PAF1Q8N7H5 AC073912.3-201ENST00000624414 853 ntBASIC19.33■□□□□ 0.68
PAF1Q8N7H5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PAF1Q8N7H5 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
PAF1Q8N7H5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PAF1Q8N7H5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PAF1Q8N7H5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.32■□□□□ 0.68
PAF1Q8N7H5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PAF1Q8N7H5 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
PAF1Q8N7H5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.32■□□□□ 0.68
PAF1Q8N7H5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PAF1Q8N7H5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PAF1Q8N7H5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.32■□□□□ 0.68
PAF1Q8N7H5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PAF1Q8N7H5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.32■□□□□ 0.68
PAF1Q8N7H5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.32■□□□□ 0.68
PAF1Q8N7H5 MFAP1P1-201ENST00000442257 1255 ntBASIC19.32■□□□□ 0.68
PAF1Q8N7H5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.32■□□□□ 0.68
PAF1Q8N7H5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PAF1Q8N7H5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PAF1Q8N7H5 AP000692.2-201ENST00000608391 879 ntBASIC19.32■□□□□ 0.68
PAF1Q8N7H5 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PAF1Q8N7H5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.32■□□□□ 0.68
PAF1Q8N7H5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PAF1Q8N7H5 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PAF1Q8N7H5 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PAF1Q8N7H5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.32■□□□□ 0.68
PAF1Q8N7H5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PAF1Q8N7H5 AC093484.2-201ENST00000580996 2166 ntBASIC19.32■□□□□ 0.68
PAF1Q8N7H5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PAF1Q8N7H5 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 KRT8P41-201ENST00000533985 1514 ntBASIC19.31■□□□□ 0.68
PAF1Q8N7H5 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 AC079598.2-202ENST00000546624 1451 ntBASIC19.31■□□□□ 0.68
PAF1Q8N7H5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 C2orf69P3-201ENST00000565542 1120 ntBASIC19.31■□□□□ 0.68
PAF1Q8N7H5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PAF1Q8N7H5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PAF1Q8N7H5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.3■□□□□ 0.68
PAF1Q8N7H5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PAF1Q8N7H5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PAF1Q8N7H5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PAF1Q8N7H5 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PAF1Q8N7H5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PAF1Q8N7H5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.3■□□□□ 0.68
PAF1Q8N7H5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PAF1Q8N7H5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PAF1Q8N7H5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PAF1Q8N7H5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.3■□□□□ 0.68
PAF1Q8N7H5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PAF1Q8N7H5 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PAF1Q8N7H5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.3■□□□□ 0.68
PAF1Q8N7H5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PAF1Q8N7H5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PAF1Q8N7H5 MESTP1-201ENST00000404287 994 ntBASIC19.3■□□□□ 0.68
PAF1Q8N7H5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms