Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 TUBB8P6-201ENST00000436895 1288 ntBASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 AL138781.1-201ENST00000566567 1274 ntBASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIML2Q8N7C3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIML2Q8N7C3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 KRT18P16-201ENST00000510337 1294 ntBASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 BICD1-207ENST00000551848 1962 ntBASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIML2Q8N7C3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 AL354751.1-201ENST00000412768 1863 ntBASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 SOX15-203ENST00000570788 1093 ntBASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 AC133041.1-202ENST00000642053 222 ntBASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 SDHAP1-207ENST00000440850 2000 ntBASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIML2Q8N7C3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIML2Q8N7C3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms