Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCUBE3Q8IX30 AC145285.6-201ENST00000604632 637 ntBASIC19.79■□□□□ 0.76
SCUBE3Q8IX30 AC012306.2-201ENST00000609350 630 ntBASIC19.79■□□□□ 0.76
SCUBE3Q8IX30 RCC2P3-201ENST00000418112 1537 ntBASIC19.79■□□□□ 0.76
SCUBE3Q8IX30 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SCUBE3Q8IX30 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCUBE3Q8IX30 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCUBE3Q8IX30 KRT18P22-201ENST00000402024 1347 ntBASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 AL023284.2-201ENST00000405850 579 ntBASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 MIR4674-201ENST00000582457 87 ntBASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 AC097493.4-201ENST00000641197 219 ntBASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 CROCCP3-202ENST00000420820 1947 ntBASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCUBE3Q8IX30 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 AC004408.2-201ENST00000623613 2777 ntBASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 FAM87A-204ENST00000613235 858 ntBASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 AC010653.2-201ENST00000623505 997 ntBASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 AC083906.6-201ENST00000641366 219 ntBASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 AC068587.9-201ENST00000641814 219 ntBASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 HEIH-201ENST00000623091 1652 ntBASIC19.77■□□□□ 0.76
SCUBE3Q8IX30 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
SCUBE3Q8IX30 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 AC008556.1-201ENST00000610908 2040 ntBASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 AC093503.3-201ENST00000624917 2352 ntBASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 AL445228.2-201ENST00000605589 952 ntBASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCUBE3Q8IX30 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 RCN1P1-201ENST00000400413 996 ntBASIC19.75■□□□□ 0.75
SCUBE3Q8IX30 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms