Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
APLFQ8IW19 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APLFQ8IW19 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
APLFQ8IW19 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
APLFQ8IW19 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
APLFQ8IW19 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.65■□□□□ 0.58
APLFQ8IW19 RCN1P1-201ENST00000400413 996 ntBASIC18.65■□□□□ 0.58
APLFQ8IW19 AL355355.2-201ENST00000442321 338 ntBASIC18.65■□□□□ 0.58
APLFQ8IW19 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.65■□□□□ 0.58
APLFQ8IW19 AL353708.3-201ENST00000610272 989 ntBASIC18.65■□□□□ 0.58
APLFQ8IW19 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.65■□□□□ 0.58
APLFQ8IW19 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.65■□□□□ 0.58
APLFQ8IW19 AC099398.1-201ENST00000567919 2776 ntBASIC18.65■□□□□ 0.58
APLFQ8IW19 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APLFQ8IW19 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APLFQ8IW19 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.65■□□□□ 0.58
APLFQ8IW19 HTR7P1-201ENST00000538670 1336 ntBASIC18.65■□□□□ 0.58
APLFQ8IW19 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
APLFQ8IW19 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
APLFQ8IW19 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APLFQ8IW19 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
APLFQ8IW19 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APLFQ8IW19 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
APLFQ8IW19 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
APLFQ8IW19 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
APLFQ8IW19 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
APLFQ8IW19 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
APLFQ8IW19 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
APLFQ8IW19 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.64■□□□□ 0.57
APLFQ8IW19 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APLFQ8IW19 TNRC18P3-201ENST00000441896 2691 ntBASIC18.64■□□□□ 0.57
APLFQ8IW19 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
APLFQ8IW19 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.64■□□□□ 0.57
APLFQ8IW19 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
APLFQ8IW19 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
APLFQ8IW19 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.64■□□□□ 0.57
APLFQ8IW19 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
APLFQ8IW19 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
APLFQ8IW19 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
APLFQ8IW19 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.64■□□□□ 0.57
APLFQ8IW19 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
APLFQ8IW19 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
APLFQ8IW19 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.64■□□□□ 0.57
APLFQ8IW19 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.64■□□□□ 0.57
APLFQ8IW19 CD177P1-201ENST00000606252 935 ntBASIC18.64■□□□□ 0.57
APLFQ8IW19 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APLFQ8IW19 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APLFQ8IW19 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
APLFQ8IW19 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.64■□□□□ 0.57
APLFQ8IW19 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.64■□□□□ 0.57
APLFQ8IW19 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APLFQ8IW19 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APLFQ8IW19 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.64■□□□□ 0.57
APLFQ8IW19 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APLFQ8IW19 NBPF21P-201ENST00000425093 1451 ntBASIC18.64■□□□□ 0.57
APLFQ8IW19 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.64■□□□□ 0.57
APLFQ8IW19 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
APLFQ8IW19 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
APLFQ8IW19 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
APLFQ8IW19 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
APLFQ8IW19 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APLFQ8IW19 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.63■□□□□ 0.57
APLFQ8IW19 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.63■□□□□ 0.57
APLFQ8IW19 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
APLFQ8IW19 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APLFQ8IW19 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APLFQ8IW19 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APLFQ8IW19 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APLFQ8IW19 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
APLFQ8IW19 MMP23A-201ENST00000234610 1017 ntBASIC18.63■□□□□ 0.57
APLFQ8IW19 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APLFQ8IW19 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.63■□□□□ 0.57
APLFQ8IW19 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.63■□□□□ 0.57
APLFQ8IW19 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.63■□□□□ 0.57
APLFQ8IW19 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
APLFQ8IW19 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APLFQ8IW19 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
APLFQ8IW19 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APLFQ8IW19 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.63■□□□□ 0.57
APLFQ8IW19 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
APLFQ8IW19 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APLFQ8IW19 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
APLFQ8IW19 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
APLFQ8IW19 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
APLFQ8IW19 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
APLFQ8IW19 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.62■□□□□ 0.57
APLFQ8IW19 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APLFQ8IW19 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APLFQ8IW19 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.62■□□□□ 0.57
APLFQ8IW19 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APLFQ8IW19 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
APLFQ8IW19 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APLFQ8IW19 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.62■□□□□ 0.57
APLFQ8IW19 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.62■□□□□ 0.57
APLFQ8IW19 AL121906.2-201ENST00000621597 723 ntBASIC18.62■□□□□ 0.57
APLFQ8IW19 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APLFQ8IW19 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
APLFQ8IW19 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
APLFQ8IW19 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
APLFQ8IW19 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms