Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYVN1Q86TM6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYVN1Q86TM6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYVN1Q86TM6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.51■□□□□ 0.55
SYVN1Q86TM6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.51■□□□□ 0.55
SYVN1Q86TM6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.51■□□□□ 0.55
SYVN1Q86TM6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SYVN1Q86TM6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.51■□□□□ 0.55
SYVN1Q86TM6 MIR6786-201ENST00000616843 113 ntBASIC18.51■□□□□ 0.55
SYVN1Q86TM6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
SYVN1Q86TM6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.51■□□□□ 0.55
SYVN1Q86TM6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.51■□□□□ 0.55
SYVN1Q86TM6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYVN1Q86TM6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SYVN1Q86TM6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYVN1Q86TM6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.51■□□□□ 0.55
SYVN1Q86TM6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.51■□□□□ 0.55
SYVN1Q86TM6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 MIR1238-201ENST00000408483 83 ntBASIC18.5■□□□□ 0.55
SYVN1Q86TM6 TMPOP1-202ENST00000424642 1267 ntBASIC18.5■□□□□ 0.55
SYVN1Q86TM6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYVN1Q86TM6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 TSPY21P-201ENST00000433481 731 ntBASIC18.49■□□□□ 0.55
SYVN1Q86TM6 TSPY23P-201ENST00000440136 739 ntBASIC18.49■□□□□ 0.55
SYVN1Q86TM6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 AC005363.2-201ENST00000618631 242 ntBASIC18.49■□□□□ 0.55
SYVN1Q86TM6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.49■□□□□ 0.55
SYVN1Q86TM6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SYVN1Q86TM6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYVN1Q86TM6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.48■□□□□ 0.55
SYVN1Q86TM6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYVN1Q86TM6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SYVN1Q86TM6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYVN1Q86TM6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.48■□□□□ 0.55
SYVN1Q86TM6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYVN1Q86TM6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYVN1Q86TM6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYVN1Q86TM6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYVN1Q86TM6 FITM1-202ENST00000559294 800 ntBASIC18.48■□□□□ 0.55
SYVN1Q86TM6 NAPSB-206ENST00000562112 1266 ntBASIC18.48■□□□□ 0.55
SYVN1Q86TM6 AC083906.6-201ENST00000641366 219 ntBASIC18.48■□□□□ 0.55
SYVN1Q86TM6 AL031985.4-201ENST00000642138 673 ntBASIC18.48■□□□□ 0.55
SYVN1Q86TM6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYVN1Q86TM6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYVN1Q86TM6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYVN1Q86TM6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYVN1Q86TM6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYVN1Q86TM6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.48■□□□□ 0.55
SYVN1Q86TM6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYVN1Q86TM6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYVN1Q86TM6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.48■□□□□ 0.55
SYVN1Q86TM6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SYVN1Q86TM6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYVN1Q86TM6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYVN1Q86TM6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.47■□□□□ 0.55
SYVN1Q86TM6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.47■□□□□ 0.55
SYVN1Q86TM6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.47■□□□□ 0.55
SYVN1Q86TM6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms