Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13CQ709C8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
VPS13CQ709C8 IGHV3-47-201ENST00000425060 335 ntBASIC15.67■□□□□ 0.1
VPS13CQ709C8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VPS13CQ709C8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.67■□□□□ 0.1
VPS13CQ709C8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.67■□□□□ 0.1
VPS13CQ709C8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VPS13CQ709C8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS13CQ709C8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS13CQ709C8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
VPS13CQ709C8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS13CQ709C8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS13CQ709C8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS13CQ709C8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.67■□□□□ 0.1
VPS13CQ709C8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.67■□□□□ 0.1
VPS13CQ709C8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.67■□□□□ 0.1
VPS13CQ709C8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VPS13CQ709C8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.67■□□□□ 0.1
VPS13CQ709C8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
VPS13CQ709C8 BX842568.4-201ENST00000421222 227 ntBASIC15.67■□□□□ 0.1
VPS13CQ709C8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.67■□□□□ 0.1
VPS13CQ709C8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.67■□□□□ 0.1
VPS13CQ709C8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.67■□□□□ 0.1
VPS13CQ709C8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS13CQ709C8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS13CQ709C8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.67■□□□□ 0.1
VPS13CQ709C8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.67■□□□□ 0.1
VPS13CQ709C8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.67■□□□□ 0.1
VPS13CQ709C8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13CQ709C8 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.66■□□□□ 0.1
VPS13CQ709C8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS13CQ709C8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13CQ709C8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.66■□□□□ 0.1
VPS13CQ709C8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS13CQ709C8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13CQ709C8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS13CQ709C8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13CQ709C8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13CQ709C8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS13CQ709C8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.66■□□□□ 0.1
VPS13CQ709C8 AL121772.3-201ENST00000610840 674 ntBASIC15.66■□□□□ 0.1
VPS13CQ709C8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS13CQ709C8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS13CQ709C8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS13CQ709C8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13CQ709C8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13CQ709C8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13CQ709C8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13CQ709C8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS13CQ709C8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13CQ709C8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13CQ709C8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS13CQ709C8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS13CQ709C8 AC106730.1-201ENST00000566722 1090 ntBASIC15.66■□□□□ 0.1
VPS13CQ709C8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.66■□□□□ 0.1
VPS13CQ709C8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.66■□□□□ 0.1
VPS13CQ709C8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13CQ709C8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13CQ709C8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13CQ709C8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13CQ709C8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13CQ709C8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.66■□□□□ 0.1
VPS13CQ709C8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13CQ709C8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.65■□□□□ 0.1
VPS13CQ709C8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
VPS13CQ709C8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13CQ709C8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.65■□□□□ 0.1
VPS13CQ709C8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
VPS13CQ709C8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.65■□□□□ 0.1
VPS13CQ709C8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13CQ709C8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13CQ709C8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13CQ709C8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13CQ709C8 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.65■□□□□ 0.1
VPS13CQ709C8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.65■□□□□ 0.1
VPS13CQ709C8 AC074051.2-201ENST00000565115 352 ntBASIC15.65■□□□□ 0.1
VPS13CQ709C8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.65■□□□□ 0.1
VPS13CQ709C8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
VPS13CQ709C8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.65■□□□□ 0.1
VPS13CQ709C8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13CQ709C8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13CQ709C8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13CQ709C8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
VPS13CQ709C8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13CQ709C8 POLD2P1-201ENST00000511220 997 ntBASIC15.65■□□□□ 0.1
VPS13CQ709C8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.65■□□□□ 0.1
VPS13CQ709C8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13CQ709C8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13CQ709C8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13CQ709C8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13CQ709C8 TREX1-205ENST00000625293 1783 ntBASIC15.65■□□□□ 0.1
VPS13CQ709C8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS13CQ709C8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.64■□□□□ 0.09
VPS13CQ709C8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
VPS13CQ709C8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
VPS13CQ709C8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13CQ709C8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13CQ709C8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13CQ709C8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS13CQ709C8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms