Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 AP001160.3-201ENST00000601484 763 ntBASIC13.65□□□□□ -0.22
LINC00173Q6ZV60 AL031963.3-201ENST00000606441 850 ntBASIC13.65□□□□□ -0.22
LINC00173Q6ZV60 AC104187.1-201ENST00000607510 612 ntBASIC13.65□□□□□ -0.22
LINC00173Q6ZV60 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC13.65□□□□□ -0.22
LINC00173Q6ZV60 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LINC00173Q6ZV60 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LINC00173Q6ZV60 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00173Q6ZV60 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00173Q6ZV60 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00173Q6ZV60 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00173Q6ZV60 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00173Q6ZV60 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00173Q6ZV60 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00173Q6ZV60 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00173Q6ZV60 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
LINC00173Q6ZV60 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 ZNF815P-204ENST00000434898 1737 ntBASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 COBL-210ENST00000632460 1941 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 EDA-201ENST00000338901 1233 ntBASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 PGM5P4-201ENST00000421970 445 ntBASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 AF213884.3-201ENST00000563833 479 ntBASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LINC00173Q6ZV60 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 AC097381.1-201ENST00000429019 1296 ntBASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 MIR6084-201ENST00000622012 110 ntBASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 PKD1P1-201ENST00000458669 6805 ntBASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00173Q6ZV60 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00173Q6ZV60 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms