Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC62Q6P9F0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC62Q6P9F0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC62Q6P9F0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CCDC62Q6P9F0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC62Q6P9F0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC62Q6P9F0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC62Q6P9F0 DUSP5P1-201ENST00000441325 1139 ntBASIC21.16■□□□□ 0.98
CCDC62Q6P9F0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
CCDC62Q6P9F0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC62Q6P9F0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.16■□□□□ 0.98
CCDC62Q6P9F0 AC079602.3-201ENST00000623931 403 ntBASIC21.16■□□□□ 0.98
CCDC62Q6P9F0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC62Q6P9F0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC62Q6P9F0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC62Q6P9F0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 ATP5G2P1-201ENST00000433580 426 ntBASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 HCG4P8-203ENST00000443049 980 ntBASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC62Q6P9F0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
CCDC62Q6P9F0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC62Q6P9F0 PCDHAC2-203ENST00000615316 3011 ntBASIC21.14■□□□□ 0.98
CCDC62Q6P9F0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC62Q6P9F0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC62Q6P9F0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC62Q6P9F0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC62Q6P9F0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.14■□□□□ 0.97
CCDC62Q6P9F0 AL645929.1-201ENST00000420084 975 ntBASIC21.14■□□□□ 0.97
CCDC62Q6P9F0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC62Q6P9F0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.14■□□□□ 0.97
CCDC62Q6P9F0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.14■□□□□ 0.97
CCDC62Q6P9F0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.14■□□□□ 0.97
CCDC62Q6P9F0 NPAP1P7-201ENST00000613027 823 ntBASIC21.14■□□□□ 0.97
CCDC62Q6P9F0 AC112497.1-201ENST00000624824 639 ntBASIC21.14■□□□□ 0.97
CCDC62Q6P9F0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.14■□□□□ 0.97
CCDC62Q6P9F0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC62Q6P9F0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC62Q6P9F0 FEM1AP3-201ENST00000403722 1741 ntBASIC21.14■□□□□ 0.97
CCDC62Q6P9F0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC62Q6P9F0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC62Q6P9F0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CCDC62Q6P9F0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CCDC62Q6P9F0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC62Q6P9F0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 RCC2P3-201ENST00000418112 1537 ntBASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CCDC62Q6P9F0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 AC008556.1-201ENST00000610908 2040 ntBASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC62Q6P9F0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms