Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.94■□□□□ 0.78
VARS2Q5ST30 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.94■□□□□ 0.78
VARS2Q5ST30 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.94■□□□□ 0.78
VARS2Q5ST30 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VARS2Q5ST30 AP001002.2-201ENST00000625137 386 ntBASIC19.94■□□□□ 0.78
VARS2Q5ST30 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VARS2Q5ST30 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
VARS2Q5ST30 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
VARS2Q5ST30 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VARS2Q5ST30 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VARS2Q5ST30 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.94■□□□□ 0.78
VARS2Q5ST30 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VARS2Q5ST30 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.94■□□□□ 0.78
VARS2Q5ST30 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.93■□□□□ 0.78
VARS2Q5ST30 KRT8P32-201ENST00000512863 1461 ntBASIC19.93■□□□□ 0.78
VARS2Q5ST30 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VARS2Q5ST30 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.93■□□□□ 0.78
VARS2Q5ST30 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VARS2Q5ST30 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VARS2Q5ST30 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.93■□□□□ 0.78
VARS2Q5ST30 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.93■□□□□ 0.78
VARS2Q5ST30 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.93■□□□□ 0.78
VARS2Q5ST30 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VARS2Q5ST30 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.93■□□□□ 0.78
VARS2Q5ST30 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VARS2Q5ST30 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VARS2Q5ST30 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VARS2Q5ST30 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VARS2Q5ST30 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VARS2Q5ST30 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VARS2Q5ST30 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VARS2Q5ST30 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
VARS2Q5ST30 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
VARS2Q5ST30 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VARS2Q5ST30 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.92■□□□□ 0.78
VARS2Q5ST30 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
VARS2Q5ST30 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
VARS2Q5ST30 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.92■□□□□ 0.78
VARS2Q5ST30 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.92■□□□□ 0.78
VARS2Q5ST30 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.92■□□□□ 0.78
VARS2Q5ST30 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VARS2Q5ST30 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VARS2Q5ST30 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VARS2Q5ST30 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.92■□□□□ 0.78
VARS2Q5ST30 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.92■□□□□ 0.78
VARS2Q5ST30 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.92■□□□□ 0.78
VARS2Q5ST30 AC069148.1-201ENST00000608741 768 ntBASIC19.92■□□□□ 0.78
VARS2Q5ST30 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.92■□□□□ 0.78
VARS2Q5ST30 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.92■□□□□ 0.78
VARS2Q5ST30 AL157888.1-201ENST00000631930 593 ntBASIC19.92■□□□□ 0.78
VARS2Q5ST30 AC093484.2-201ENST00000580996 2166 ntBASIC19.92■□□□□ 0.78
VARS2Q5ST30 AL032819.2-201ENST00000624543 2162 ntBASIC19.92■□□□□ 0.78
VARS2Q5ST30 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VARS2Q5ST30 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
VARS2Q5ST30 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VARS2Q5ST30 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
VARS2Q5ST30 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
VARS2Q5ST30 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VARS2Q5ST30 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
VARS2Q5ST30 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VARS2Q5ST30 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
VARS2Q5ST30 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
VARS2Q5ST30 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.91■□□□□ 0.78
VARS2Q5ST30 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.91■□□□□ 0.78
VARS2Q5ST30 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
VARS2Q5ST30 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VARS2Q5ST30 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VARS2Q5ST30 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VARS2Q5ST30 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.91■□□□□ 0.78
VARS2Q5ST30 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VARS2Q5ST30 AL450487.1-201ENST00000426799 995 ntBASIC19.91■□□□□ 0.78
VARS2Q5ST30 KRT18P23-201ENST00000435622 1283 ntBASIC19.91■□□□□ 0.78
VARS2Q5ST30 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.91■□□□□ 0.78
VARS2Q5ST30 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.91■□□□□ 0.78
VARS2Q5ST30 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
VARS2Q5ST30 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.91■□□□□ 0.78
VARS2Q5ST30 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VARS2Q5ST30 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
VARS2Q5ST30 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VARS2Q5ST30 AC007952.6-201ENST00000573168 2673 ntBASIC19.91■□□□□ 0.78
VARS2Q5ST30 AC003957.1-201ENST00000625108 2673 ntBASIC19.91■□□□□ 0.78
VARS2Q5ST30 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VARS2Q5ST30 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.91■□□□□ 0.78
VARS2Q5ST30 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VARS2Q5ST30 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
VARS2Q5ST30 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VARS2Q5ST30 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.9■□□□□ 0.78
VARS2Q5ST30 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.9■□□□□ 0.78
VARS2Q5ST30 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.9■□□□□ 0.78
VARS2Q5ST30 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VARS2Q5ST30 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
VARS2Q5ST30 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
VARS2Q5ST30 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
VARS2Q5ST30 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
VARS2Q5ST30 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VARS2Q5ST30 MIR564-202ENST00000385049 94 ntBASIC19.9■□□□□ 0.78
VARS2Q5ST30 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VARS2Q5ST30 AL645929.1-201ENST00000420084 975 ntBASIC19.9■□□□□ 0.78
VARS2Q5ST30 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
VARS2Q5ST30 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms