Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC012640.2-201ENST00000561606 901 ntBASIC16.31■□□□□ 0.2
LRRK2Q5S007 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LRRK2Q5S007 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRK2Q5S007 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRK2Q5S007 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRK2Q5S007 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRK2Q5S007 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRK2Q5S007 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRK2Q5S007 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRK2Q5S007 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRK2Q5S007 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRK2Q5S007 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRK2Q5S007 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.3■□□□□ 0.2
LRRK2Q5S007 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRK2Q5S007 AL096865.1-201ENST00000606796 927 ntBASIC16.3■□□□□ 0.2
LRRK2Q5S007 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRK2Q5S007 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRK2Q5S007 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRK2Q5S007 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LRRK2Q5S007 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRK2Q5S007 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRK2Q5S007 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRK2Q5S007 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
LRRK2Q5S007 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRK2Q5S007 FGFR3P6-201ENST00000457012 610 ntBASIC16.3■□□□□ 0.2
LRRK2Q5S007 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
LRRK2Q5S007 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRK2Q5S007 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRK2Q5S007 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRK2Q5S007 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRK2Q5S007 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LRRK2Q5S007 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRK2Q5S007 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRK2Q5S007 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
LRRK2Q5S007 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRK2Q5S007 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRK2Q5S007 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRK2Q5S007 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LRRK2Q5S007 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRK2Q5S007 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRK2Q5S007 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRK2Q5S007 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRK2Q5S007 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRK2Q5S007 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRK2Q5S007 MCCD1P2-201ENST00000423228 335 ntBASIC16.29■□□□□ 0.2
LRRK2Q5S007 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRK2Q5S007 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.29■□□□□ 0.2
LRRK2Q5S007 AC008735.5-201ENST00000623544 497 ntBASIC16.29■□□□□ 0.2
LRRK2Q5S007 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRK2Q5S007 AL691432.2-201ENST00000607222 2038 ntBASIC16.29■□□□□ 0.2
LRRK2Q5S007 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRK2Q5S007 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRK2Q5S007 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRK2Q5S007 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRK2Q5S007 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LRRK2Q5S007 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRK2Q5S007 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRK2Q5S007 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRK2Q5S007 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRK2Q5S007 RN7SL606P-201ENST00000472779 293 ntBASIC16.29■□□□□ 0.2
LRRK2Q5S007 GUSBP12-201ENST00000513727 720 ntBASIC16.29■□□□□ 0.2
LRRK2Q5S007 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRK2Q5S007 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.29■□□□□ 0.2
LRRK2Q5S007 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRK2Q5S007 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRK2Q5S007 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRK2Q5S007 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRK2Q5S007 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRK2Q5S007 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.29■□□□□ 0.2
LRRK2Q5S007 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRK2Q5S007 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LRRK2Q5S007 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRK2Q5S007 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LRRK2Q5S007 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRK2Q5S007 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRK2Q5S007 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRK2Q5S007 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRK2Q5S007 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRK2Q5S007 Z83851.2-201ENST00000609564 659 ntBASIC16.28■□□□□ 0.2
LRRK2Q5S007 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRK2Q5S007 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRK2Q5S007 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRK2Q5S007 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRK2Q5S007 AL049796.1-201ENST00000565336 1766 ntBASIC16.28■□□□□ 0.2
LRRK2Q5S007 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRK2Q5S007 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LRRK2Q5S007 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
LRRK2Q5S007 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRK2Q5S007 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRK2Q5S007 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
LRRK2Q5S007 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRK2Q5S007 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRK2Q5S007 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRK2Q5S007 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRK2Q5S007 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRK2Q5S007 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRK2Q5S007 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRK2Q5S007 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRK2Q5S007 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.27■□□□□ 0.2
LRRK2Q5S007 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms